Evidence map›Paper›PMID 17192258›Full record

ArticleMolecular & cellular proteomics : MCP2007

The alliance for cellular signaling plasmid collection: a flexible resource for protein localization studies and signaling pathway analysis.

Joelle R Zavzavadjian, Sam Couture, Wei Sun Park, James Whalen, Stephen Lyon, Genie Lee, Eileen Fung, Qingli Mi, Jamie Liu, Estelle Wall and 19 more

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Joelle R ZavzavadjianAlliance for Cellular Signaling, California Institute of Technology, CA 94305, USA.
Sam Couture
Wei Sun Park
James Whalen
Stephen Lyon
Genie Lee
Eileen Fung
Qingli Mi
Jamie Liu
Estelle Wall
Leah Santat
Kavitha Dhandapani
Christine Kivork
Adrienne Driver
Xiaocui Zhu
Mi Sook Chang
Baljinder Randhawa
Elizabeth Gehrig
Heather Bryan
Mary Verghese
Andreia Maer
Brian Saunders
Yuhong Ning
Shankar Subramaniam
Tobias Meyer
Melvin I Simon
Nancy O'Rourke
Grischa Chandy
Iain D C Fraser

Funding

MICROFABRICATED DYNAMIC ARRY CYTOMETER FOR CELL SIGNALINU54GM062114 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GRAY, MARTHA L · 2000 to 2007
$63.7M
REGULATION OF CA++/CALMODULIN KINASE BY NEUROTRANSMITTERR01GM030179 · NIGMS · STANFORD UNIVERSITY · PI MEYER, TOBIAS · 1985 to 2018
$4.9M
NIGMS NIH HHS R01 GM030179NIGMS NIH HHS U54 GM062114
6 · The paper itself

Abstract

Cellular responses to inputs that vary both temporally and spatially are determined by complex relationships between the components of cell signaling networks. Analysis of these relationships requires access to a wide range of experimental reagents and techniques, including the ability to express the protein components of the model cells in a variety of contexts. As part of the Alliance for Cellular Signaling, we developed a robust method for cloning large numbers of signaling ORFs into Gateway entry vectors, and we created a wide range of compatible expression platforms for proteomics applications. To date, we have generated over 3000 plasmids that are available to the scientific community via the American Type Culture Collection. We have established a website at www.signaling-gateway.org/data/plasmid/ that allows users to browse, search, and blast Alliance for Cellular Signaling plasmids. The collection primarily contains murine signaling ORFs with an emphasis on kinases and G protein signaling genes. Here we describe the cloning, databasing, and application of this proteomics resource for large scale subcellular localization screens in mammalian cell lines.

Indexed as

ProteomicsAnimalsCell LineCloning, MolecularDatabases, FactualDNA, ComplementaryMiceOpen Reading FramesPlasmidsProtein KinasesSignal TransductionDNA, ComplementaryProtein Kinases

Identifiers

PMID17192258
PMCPMC3579516

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.