Evidence map›Paper›PMID 17190827›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Structural basis for intramembrane proteolysis by rhomboid serine proteases.

Adam Ben-Shem, Deborah Fass, Eitan Bibi

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 174 citations in OpenAlex.

  1. The Evolution of Lipids from Solvents to Substrates.Annual review of biophysics · 2026
    Review
  2. Article
  3. Structural insights into human signal peptide peptidase.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  5. Review
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  7. Article
  8. Article
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  13. Structural cavities are critical to balancing stability and activity of a membrane-integral enzyme.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Structural analysis of aThe Journal of biological chemistry · 2019
    Article
  19. Article
  20. Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Adam Ben-ShemDepartment of Biological Chemistry, The Weizmann Institute of Science, Rehovot 76100, Israel. adam.ben-shem@weizmann.ac.il
Deborah Fass
Eitan Bibi
Weizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intramembrane proteases catalyze peptide bond cleavage of integral membrane protein substrates. This activity is crucial for many biological and pathological processes. Rhomboids are evolutionarily widespread intramembrane serine proteases. Here, we present the 2.3-A-resolution crystal structure of a rhomboid from Escherichia coli. The enzyme has six transmembrane helices, five of which surround a short TM4, which starts deep within the membrane at the catalytic serine residue. Thus, the catalytic serine is in an externally exposed cavity, which provides a hydrophilic environment for proteolysis. Our results reveal a mechanism to enable water-dependent catalysis at the depth of the hydrophobic milieu of the membrane and suggest how substrates gain access to the sequestered rhomboid active site.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCatalytic DomainCrystallography, X-RayDNA, BacterialDNA-Binding ProteinsDNA PrimersEndopeptidasesEscherichia coliEscherichia coli ProteinsHumansMembrane ProteinsMembranesModels, MolecularMolecular Sequence DataDNA, BacterialDNA-Binding ProteinsDNA PrimersEndopeptidasesEscherichia coli ProteinsGlpG protein, E coliMembrane ProteinsRecombinant ProteinsSerine Endopeptidases

Identifiers

PMID17190827
PMCPMC1766407
OpenAlexW1975881598

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.