Evidence map›Paper›PMID 17190812›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Genetic regulation of patterned tubular branching in Drosophila.

E Hatton-Ellis, C Ainsworth, Y Sushama, S Wan, K VijayRaghavan, H Skaer

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. Tau Regulates Endoreplication inmicroPublication biology · 2026
    Article
  2. The cryptonephridial/rectal complex: an evolutionary adaptation for water and ion conservation.Biological reviews of the Cambridge Philosophical Society · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Early patterning followed by tissue growth establishes distal identity inFrontiers in cell and developmental biology · 2022
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Drosophila provides rapid modeling of renal development, function, and disease.American journal of physiology. Renal physiology · 2010
    Review
  13. Article
  14. Article
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

E Hatton-EllisDepartment of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, United Kingdom.
C Ainsworth
Y Sushama
S Wan
K VijayRaghavan
H Skaer
University of Cambridge · GBNational Centre for Biological Sciences · INUniversity of Sheffield · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

A common theme in organogenesis is the branching of epithelial tubes, for example in the lung, liver, or kidney. The later morphogenesis of these branched epithelia dictates the final form and function of the mature tissue. Epithelial branching requires the specification of branch cells, the eversion process itself, and, frequently, patterned morphogenesis to produce branches of specific shape and orientation. Using the branching of renal tubule primordia from the hindgut in Drosophila, we show that these aspects are coordinately regulated. Cell specification depends on Wnt signaling along the tubular gut and results in the spatially restricted coexpression of two transcription factors, Krüppel and Cut, in the hindgut, whose activity drives cells toward renal tubule fate. Significantly, these transcription factors also confer the competence to respond to a second signal; TGF-beta induces branching to form the four renal tubule buds. Differential activation of the TGF-beta pathway also patterns the tubules, resulting in the asymmetry in size and positioning that is characteristic of the two tubule pairs. High levels of TGF-beta promote the expression of Dorsocross1-3 and anterior tubule growth, whereas low levels allow the expression of the transcriptional repressor, Brinker, and thus promote posterior tubule identity. We show that patterning of the tubule primordium into two distinct pairs is critical for the eversion of tubule branches, as well as for their asymmetric morphogenesis.

Indexed as

Body PatterningAnimalsDrosophilaDrosophila ProteinsGene Expression Regulation, DevelopmentalKidney TubulesRepressor ProteinsSignal TransductionTranscription FactorsTransforming Growth Factor betaWnt Proteinsbrk protein, DrosophilaDrosophila ProteinsRepressor ProteinsTranscription FactorsTransforming Growth Factor betaWnt Proteins

Identifiers

PMID17190812
PMCPMC1765429
OpenAlexW2144465164

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.