Evidence map›Paper›PMID 17190607›Full record

ArticleCell2006

Neuronal transcriptome of Aplysia: neuronal compartments and circuitry.

Leonid L Moroz, John R Edwards, Sathyanarayanan V Puthanveettil, Andrea B Kohn, Thomas Ha, Andreas Heyland, Bjarne Knudsen, Anuj Sahni, Fahong Yu, Li Liu and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 179 papers.

0numbers the graph read from it
0cells of the map it votes in
179citing papers in PubMed
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

179 citing papers in PubMed, 334 citations in OpenAlex.

  1. Article
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  6. Review
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  8. Review
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  10. DNA Methylation Machinery in Gastropod Mollusks.Life (Basel, Switzerland) · 2024
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  13. Molecular Characterization, Expression andCurrent protein & peptide science · 2024
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  16. Endogenous l- to d-amino acid residue isomerization modulates selectivity between distinct neuropeptide receptor family members.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  17. Article
  18. Characterization of anFrontiers in pharmacology · 2023
    Article
  19. Transposon-derived transcription factors across metazoans.Frontiers in cell and developmental biology · 2023
    Article
  20. Article

119 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 2 institutions in 1 country.

Leonid L MorozThe Whitney Laboratory for Marine Bioscience, University of Florida, 9505 Ocean Shore Boulevard, St. Augustine, FL 32080, USA. moroz@whitney.ufl.edu
John R Edwards
Sathyanarayanan V Puthanveettil
Andrea B Kohn
Thomas Ha
Andreas Heyland
Bjarne Knudsen
Anuj Sahni
Fahong Yu
Li Liu
Sami Jezzini
Peter Lovell
William Iannucculli
Minchen Chen
Tuan Nguyen
Huitao Sheng
Regina Shaw
Sergey Kalachikov
Yuri V Panchin
William Farmerie
James J Russo
Jingyue Ju
Eric R Kandel
University of Florida · USColumbia University · US

Funding

Genomic Approaches to Neuronal Diversity and PlasticityP50HG002806 · NHGRI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI JU, JINGYUE · 2003 to 2007
$13.9M
Gene Expression Analysis of Aplysia Neural NetworkR01MH075026 · NIMH · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI JU, JINGYUE · 2005 to 2009
$2.9M
NOS-INDEPENDENT NO PRODUCTION IN THE NERVOUS SYSTEMR01NS039103 · NINDS · UNIVERSITY OF FLORIDA · PI MOROZ, LEONID L · 1999 to 2002
$530k
NHGRI NIH HHS P50 HG002806NIMH NIH HHS R01 MH075026NINDS NIH HHS NS39103NINDS NIH HHS R01 NS039103
6 · The paper itself

Abstract

Molecular analyses of Aplysia, a well-established model organism for cellular and systems neural science, have been seriously handicapped by a lack of adequate genomic information. By sequencing cDNA libraries from the central nervous system (CNS), we have identified over 175,000 expressed sequence tags (ESTs), of which 19,814 are unique neuronal gene products and represent 50%-70% of the total Aplysia neuronal transcriptome. We have characterized the transcriptome at three levels: (1) the central nervous system, (2) the elementary components of a simple behavior: the gill-withdrawal reflex-by analyzing sensory, motor, and serotonergic modulatory neurons, and (3) processes of individual neurons. In addition to increasing the amount of available gene sequences of Aplysia by two orders of magnitude, this collection represents the largest database available for any member of the Lophotrochozoa and therefore provides additional insights into evolutionary strategies used by this highly successful diversified lineage, one of the three proposed superclades of bilateral animals.

Indexed as

Synaptic TransmissionTranscription, GeneticAnimalsAplysiaCentral Nervous SystemDatabases, GeneticEvolution, MolecularExpressed Sequence TagsGanglia, InvertebrateGillsNerve NetNeuronsPhylogeny

Identifiers

PMID17190607
PMCPMC4024467
OpenAlexW2042249753

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.