ArticleProceedings of the National Academy of Sciences of the United States of America2006
Microinversions in mammalian evolution.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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Who cites it
25 citing papers in PubMed.
- kamino: fast proteome-wide variant calling for amino acid phylogenomics.Molecular biology and evolution · 2026Article
- Article
- Insertions and Deletions: Computational Methods, Evolutionary Dynamics, and Biological Applications.Molecular biology and evolution · 2024Review
- Characteristics and possible mechanisms of formation of microinversions distinguishing human and chimpanzee genomes.Scientific reports · 2022Article
- Characterization of the chloroplast genome of Lonicera ruprechtiana Regel and comparison with other selected species of Caprifoliaceae.PloS one · 2022Article
- The Landscape of Micro-Inversions Provide Clues for Population Genetic Analysis of Humans.Interdisciplinary sciences, computational life sciences · 2020Article
- Micro-Inversions In Human Cancer Genomes.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2018Article
- A survey of localized sequence rearrangements in human DNA.Nucleic acids research · 2018Article
- Article
- Identifying micro-inversions using high-throughput sequencing reads.BMC genomics · 2016Article
- Split-alignment of genomes finds orthologies more accurately.Genome biology · 2015Article
- Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi.Genome biology · 2014Article
- Identification of polymorphic inversions from genotypes.BMC bioinformatics · 2012Article
- Pico-inplace-inversions between human and chimpanzee.Bioinformatics (Oxford, England) · 2011Article
- Abundance of ultramicro inversions within local alignments between human and chimpanzee genomes.BMC evolutionary biology · 2011Article
- Homoplastic microinversions and the avian tree of life.BMC evolutionary biology · 2011Article
- Breakpoint graphs and ancestral genome reconstructions.Genome research · 2009Article
- Cruciform-forming inverted repeats appear to have mediated many of the microinversions that distinguish the human and chimpanzee genomes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2009Article
- The infinite sites model of genome evolution.Proceedings of the National Academy of Sciences of the United States of America · 2008Article
- Confirming the phylogeny of mammals by use of large comparative sequence data sets.Molecular biology and evolution · 2008Article
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Authors and funding
3 authors.
Funding
Abstract
We propose an approach for identifying microinversions across different species and show that microinversions provide a source of low-homoplasy evolutionary characters. These characters may be used as "certificates" to verify different branches in a phylogenetic tree, turning the challenging problem of phylogeny reconstruction into a relatively simple algorithmic problem. We estimate that there exist hundreds of thousands of microinversions in genomes of mammals from comparative sequencing projects, an untapped source of new phylogenetic characters.
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