Evidence map›Paper›PMID 17189369›Full record

ArticleJournal of bacteriology2007

Mutations of the act promoter in Myxococcus xanthus.

Thomas M A Gronewold, Dale Kaiser

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. A cascade of coregulating enhancer binding proteins initiates and propagates a multicellular developmental program.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  11. Ongoing purifying selection on intergenic spacers in group A streptococcus.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2011
    Article
  12. Article
  13. Myxobacteria, polarity, and multicellular morphogenesis.Cold Spring Harbor perspectives in biology · 2010
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Thomas M A GronewoldDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305-5329, USA.
Dale Kaiser
Stanford University · US

Funding

CONTROL OF MULTICELLULAR DEVELOPMENT IN MYXOBACTERIAR37GM023441 · NIGMS · STANFORD UNIVERSITY · PI KAISER, DALE · 1995 to 2004
$2.1M
CONTROL OF MULTICELLULAR DEVELOPMENT IN MYXOBACTERIAR01GM023441 · NIGMS · STANFORD UNIVERSITY · PI KAISER, DALE · 1985 to 1994
–
NIGMS NIH HHS GM 23441NIGMS NIH HHS R37 GM023441
6 · The paper itself

Abstract

Mutations within the -12 and -24 elements provide evidence that the act promoter is recognized by sigma-54 RNA polymerase. Deletion of the -20 base pair, which lies between the two conserved elements of sigma-54 promoters, decreased expression by 90%. In addition, mutation of a potential enhancer sequence, around -120, led to an 80% reduction in act gene expression. actB, the second gene in the act operon, encodes a sigma-54 activator protein that is proposed to be an enhancer-binding protein for the act operon. All act genes, actA to actE, are expressed together and constitute an operon, because an in-frame deletion of actB decreased expression of actA and actE to the same extent. After an initially slow phase of act operon expression, which depends on FruA, there is a rapid phase. The rapid phase is shown to be due to the activation of the operon expression by ActB, which completes a positive feedback loop. That loop appears to be nested within a larger positive loop in which ActB is activated by the C signal via ActA, and the act operon activates transcription of the csgA gene. We propose that, as cells engage in more C signaling, positive feedback raises the number of C-signal molecules per cell and drives the process of fruiting body development forward.

Indexed as

Promoter Regions, GeneticAmino Acid SequenceBacterial ProteinsMolecular Sequence DataMutationMyxococcus xanthusOperonRegulatory Sequences, Nucleic AcidSignal TransductionTranscription FactorsBacterial ProteinsFruA protein, Myxococcus xanthuslipase activator protein, BacteriaTranscription Factors

Identifiers

PMID17189369
PMCPMC1855723
OpenAlexW2059541295

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.