Evidence map›Paper›PMID 17182576›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2007

Distinct and shared transcriptomes are regulated by microphthalmia-associated transcription factor isoforms in mast cells.

Amir H Shahlaee, Stephanie Brandal, Youl-Nam Lee, Chunfa Jie, Clifford M Takemoto

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 42 citations in OpenAlex.

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  7. Anaphylaxis: Focus on Transcription Factor Activity.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Amir H ShahlaeeDivision of Pediatric Hematology, Johns Hopkins University, Baltimore, MD 21205, USA. ctakemot@jhmi.edu
Stephanie Brandal
Youl-Nam Lee
Chunfa Jie
Clifford M Takemoto
Johns Hopkins University · US

Funding

Genetic networks that regulate the mast lineageR01HL077178 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI TAKEMOTO, CLIFFORD M · 2005 to 2009
$1.6M
NHLBI NIH HHS 5R01HL077178NHLBI NIH HHS R01 HL077178
6 · The paper itself

Abstract

The Microphthalmia-associated transcription factor (Mitf) is an essential basic helix-loop-helix leucine zipper transcription factor for mast cell development. Mice deficient in Mitf harbor a severe mast cell deficiency, and Mitf-mutant mast cells cultured ex vivo display a number of functional defects. Therefore, an understanding of the genetic program regulated by Mitf may provide important insights into mast cell differentiation. Multiple, distinct isoforms of Mitf have been identified in a variety of cell types; we found that Mitf-a, Mitf-e, and Mitf-mc were the major isoforms expressed in mast cells. To determine the physiologic function of Mitf in mast cells, we restored expression of these isoforms in primary mast cells from Mitf(-/-) mice. We found that these isoforms restored granular morphology and integrin-mediated migration. By microarray analysis, proteases, signaling molecules, cell surface receptor, and transporters comprised the largest groups of genes up-regulated by all isoforms. Furthermore, we found that isoforms also regulated distinct genes sets, suggesting separable biological activities. This work defines the transcriptome regulated by Mitf in mast cells and supports its role as master regulator of mast cell differentiation. Expression of multiple isoforms of this transcription factor may provide for redundancy of biological activities while also allowing diversity of function.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsCell AdhesionCell DifferentiationCell MovementGene Expression ProfilingIntegrinsMast CellsMiceMice, Inbred StrainsMicrophthalmia-Associated Transcription FactorOligonucleotide Array Sequence AnalysisProtein IsoformsTranscription, GeneticIntegrinsMicrophthalmia-Associated Transcription FactorProtein Isoforms

Identifiers

PMID17182576
PMCPMC2605087
OpenAlexW2108233183

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.