Evidence map›Paper›PMID 17180675›Full record

ArticleChromosoma2007

The cenH3 histone variant defines centromeres in Giardia intestinalis.

S C Dawson, M S Sagolla, W Z Cande

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Chromosoma, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 50 citations in OpenAlex.

  1. Cytotoxic effects of ivermectin onFrontiers in microbiology · 2024
    Article
  2. Analysis of the role of acetylation inFrontiers in microbiology · 2024
    Article
  3. Review
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  15. Holocentric chromosomes: convergent evolution, meiotic adaptations, and genomic analysis.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2012
    Review
  16. Article
  17. Article
  18. Article
  19. Histone variants--ancient wrap artists of the epigenome.Nature reviews. Molecular cell biology · 2010
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

S C DawsonSection of Microbiology, 255 Briggs Hall, One Shields Avenue, UC-Davis, Davis, CA 95616, USA. scdawson@ucdavis.edu
M S Sagolla
W Z Cande
Berkeley College · USUniversity of California, Berkeley · USUniversity of California, Davis · US

Funding

Kinesin like proteins in the parasite, GiardiaR01AI054693 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI CANDE, WILLIAM ZACHEUS · 2003 to 2012
$3.5M
NIAID NIH HHS AI054693NIAID NIH HHS R01 AI054693
6 · The paper itself

Abstract

Histone H3 variants play critical roles in the functional specialization of chromatin by epigenetically marking centromeric chromatin and transcriptionally active or silent genes. Specifically, the cenH3 histone variant acts as the primary epigenetic determinant of the site of kinetochore assembly at centromeres. Although the function of histone variants is well studied in plants, animals, and fungi, there is little knowledge of the evolutionary conservation of histone variants and their function in most protists. We find that Giardia intestinalis--a diplomonad parasite with two equivalent nuclei--has two phylogenetically distinct histone H3 variants with N-terminal extensions and nonconserved promoters. To determine their role in chromatin dynamics, conventional H3 and the two H3 variants were GFP-tagged, and their subcellular location was monitored during interphase and mitosis. We demonstrate that one cenH3-like variant has a conserved function in epigenetically marking centromeres. The other H3 variant (H3B) has a punctate distribution on chromosomes, but does not colocalize with active transcriptional regions as indicated by H3K4 methylation. We suggest that H3B could instead mark noncentromeric heterochromatin. Giardia is a member of the Diplomonads and represents an ancient divergence from metazoans and fungi. We confirm the ancient role of histone H3 variants in modulating chromatin architecture, and suggest that monocentric chromosomes represent an ancestral chromosome morphology.

Indexed as

Genetic VariationPhylogenyAmino Acid SequenceAnimalsBase SequenceBayes TheoremCentromereDNA PrimersEpigenesis, GeneticGiardia lambliaHeterochromatinHistonesMicroscopy, FluorescenceMitosisModels, GeneticMolecular Sequence DataDNA PrimersHeterochromatinHistones

Identifiers

PMID17180675
OpenAlexW2004118175

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.