Evidence map›Paper›PMID 17179071›Full record

ArticleGenetics2007

Transposition of a fungal miniature inverted-repeat transposable element through the action of a Tc1-like transposase.

Marie Dufresne, Aurélie Hua-Van, Hala Abd El Wahab, Sarrah Ben M'Barek, Christelle Vasnier, Laure Teysset, Gert H J Kema, Marie-Josée Daboussi

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 55 citations in OpenAlex.

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  3. Basal Rot ofFrontiers in microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Marie DufresneInstitut de Génétique et Microbiologie, Université Paris-Sud, UMR8621, F-91405 Orsay, France.
Aurélie Hua-Van
Hala Abd El Wahab
Sarrah Ben M'Barek
Christelle Vasnier
Laure Teysset
Gert H J Kema
Marie-Josée Daboussi
Université Paris-Sud · FRWageningen University & Research · NLCentre National de la Recherche Scientifique · FRSorbonne Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mimp1 element previously identified in the ascomycete fungus Fusarium oxysporum has hallmarks of miniature inverted-repeat transposable elements (MITEs): short size, terminal inverted repeats (TIRs), structural homogeneity, and a stable secondary structure. Since mimp1 has no coding capacity, its mobilization requires a transposase-encoding element. On the basis of the similarity of TIRs and target-site preference with the autonomous Tc1-like element impala, together with a correlated distribution of both elements among the Fusarium genus, we investigated the ability of mimp1 to jump upon expression of the impala transposase provided in trans. Under these conditions, we present evidence that mimp1 transposes by a cut-and-paste mechanism into TA dinucleotides, which are duplicated upon insertion. Our results also show that mimp1 reinserts very frequently in genic regions for at least one-third of the cases. We also show that the mimp1/impala double-component system is fully functional in the heterologous species F. graminearum, allowing the development of a highly efficient tool for gene tagging in filamentous fungi.

Indexed as

Repetitive Sequences, Nucleic AcidBase SequenceDNA, FungalDNA Transposable ElementsFusariumMolecular Sequence DataPlasmidsPolymerase Chain ReactionSequence Homology, Nucleic AcidTransformation, GeneticTransposasesDNA, FungalDNA Transposable ElementsTransposases

Identifiers

PMID17179071
PMCPMC1775018
OpenAlexW2065370523

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.