Evidence map›Paper›PMID 17178841›Full record

ArticleMolecular and cellular biology2007

Knockdown of ALR (MLL2) reveals ALR target genes and leads to alterations in cell adhesion and growth.

Irina Issaeva, Yulia Zonis, Tanya Rozovskaia, Kira Orlovsky, Carlo M Croce, Tatsuya Nakamura, Alex Mazo, Lea Eisenbach, Eli Canaani

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 227 papers.

0numbers the graph read from it
0cells of the map it votes in
227citing papers in PubMed
8.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

227 citing papers in PubMed, 377 citations in OpenAlex.

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167 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Irina IssaevaDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 76100, Israel.
Yulia Zonis
Tanya Rozovskaia
Kira Orlovsky
Carlo M Croce
Tatsuya Nakamura
Alex Mazo
Lea Eisenbach
Eli Canaani
Weizmann Institute of Science · ILCancer Genetics (United States) · USThomas Jefferson University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ALR (MLL2) is a member of the human MLL family, which belongs to a larger SET1 family of histone methyltransferases. We found that ALR is present within a stable multiprotein complex containing a cohort of proteins shared with other SET1 family complexes and several unique components, such as PTIP and the jumonji family member UTX. Like other complexes formed by SET1 family members, the ALR complex exhibited strong H3K4 methyltransferase activity, conferred by the ALR SET domain. By generating ALR knockdown cell lines and comparing their expression profiles to that of control cells, we identified a set of genes whose expression is activated by ALR. Some of these genes were identified by chromatin immunoprecipitation as direct ALR targets. The ALR complex was found to associate in an ALR-dependent fashion with promoters and transcription initiation sites of target genes and to induce H3K4 trimethylation. The most characteristic features of the ALR knockdown cells were changes in the dynamics and mode of cell spreading/polarization, reduced migration capacity, impaired anchorage-dependent and -independent growth, and decreased tumorigenicity in mice. Taken together, our results suggest that ALR is a transcriptional activator that induces the transcription of target genes by covalent histone modification. ALR appears to be involved in the regulation of adhesion-related cytoskeletal events, which might affect cell growth and survival.

Indexed as

Cell ProliferationAnimalsApoptosisCell AdhesionCell MovementChromatin ImmunoprecipitationDNA-Binding ProteinsGene Expression ProfilingHeLa CellsHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHumansK562 CellsMethylationMiceMice, NudeDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseHistone MethyltransferasesKMT2D protein, humanNeoplasm ProteinsProtein Methyltransferases

Identifiers

PMID17178841
PMCPMC1820476
OpenAlexW2159885528

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.