Evidence map›Paper›PMID 17177984›Full record

ArticleBMC microbiology2006

Effect of iron on the expression of sirR and sitABC in biofilm-associated Staphylococcus epidermidis.

Caroline Massonet, Valerie Pintens, Rita Merckx, Jozef Anné, Elke Lammertyn, Johan Van Eldere

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Manganese uptake and streptococcal virulence.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2015
    Review
  5. Metallobiology of Tuberculosis.Microbiology spectrum · 2014
    Review
  6. Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Caroline MassonetLab medical microbiology, Department Medical Diagnostic Sciences, KULeuven, U,Z,Gasthuisberg, Herestraat 49 CDG8th floor, B-3000, Leuven, Belgium. caroline.massonet@med.kuleuven.be
Valerie Pintens
Rita Merckx
Jozef Anné
Elke Lammertyn
Johan Van Eldere
KU Leuven · BE

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundDifferent gene expression patterns correlate with the altered phenotype in biofilm-associated bacteria. Iron and iron-linked genes are thought to play a key-role in biofilm formation. The expression of Fe-linked genes (sirR, sitABC operon) in Staphylococcus epidermidis, was compared in planktonic versus sessile bacteria in vitro and in vivo in a subcutaneous foreign body rat model.

resultsIn vitro in a Fe-limited environment, the planktonic form of S. epidermidis produces siderophores and grows slower than in Fe-rich environment. The expression of sirR in planktonic bacteria, in vitro, was not different in medium without Fe or with 1 microM FeCl3. High Fe concentrations (25 microM FeCl3) increased expression of sirR transiently during the early phase of incubation. Expression of sitC in vitro, in planktonic bacteria, was inversely correlated with sirR expression in medium with 25 microM FeCl3: sitC expression decreased for the first 3 hours followed by an up regulation.In sessile bacteria in vitro, sirR expression was high and independent of the Fe concentration. The expression of sitC was not inversely correlated to sirR expression. In vivo, expression levels of sirR and of sitABC were high during the initial phase after implantation and, after a transient decrease, remained stable over a period of two weeks.

conclusionOur data suggest that the expression of sirR and the regulatory effect of sirR on the sitABC operon are different in planktonic and sessile bacteria.

Indexed as

Analysis of VarianceAnimalsBacterial ProteinsBiofilmsCell DivisionChloridesCulture MediaDNA, BacterialFerric CompoundsGene DosageGene Expression Regulation, BacterialGenes, BacterialIronKineticsOperonPolymerase Chain ReactionBacterial ProteinsChloridesCulture MediaDNA, Bacterialferric chlorideFerric CompoundsIronRepressor ProteinsSiderophoresSirR protein, Staphylococcus epidermidis

Identifiers

PMID17177984
PMCPMC1764749
OpenAlexW1499851020

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.