Evidence map›Paper›PMID 17173480›Full record

ArticlePLoS pathogens2006

NFAT5 regulates HIV-1 in primary monocytes via a highly conserved long terminal repeat site.

Shahin Ranjbar, Alla V Tsytsykova, Sang-Kyung Lee, Ricardo Rajsbaum, James V Falvo, Judy Lieberman, Premlata Shankar, Anne E Goldfeld

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. TheFuture virology · 2020
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Molecular Understanding of HIV-1 Latency.Advances in virology · 2012
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Shahin RanjbarCBR Institute for Biomedical Research, Harvard Medical School, Boston, Massachusetts, United States of America.
Alla V Tsytsykova
Sang-Kyung Lee
Ricardo Rajsbaum
James V Falvo
Judy Lieberman
Premlata Shankar
Anne E Goldfeld
Harvard University · USHanyang University · KR

Funding

HIV-1 regulation by MTb: pathogen and host factorR01AI065285 · NIAID · IMMUNE DISEASE INSTITUTE, INC. · PI GOLDFELD, ANNE · 2005 to 2009
$2.1M
Enhancing HIV-specific CTL by CD27/CD70 costimulationR21AI065342 · NIAID · IMMUNE DISEASE INSTITUTE, INC. · PI SHANKAR, PREMLATA · 2005 to 2006
$560k
HIV-1 regulation by MTb: pathogen and host factorR56AI065285 · NIAID · IMMUNE DISEASE INSTITUTE, INC. · PI GOLDFELD, ANNE · 2010 to 2010
$525k
Clade-specific regulation of HIV-1 by M tuberculosisR21AI060433 · NIAID · IMMUNE DISEASE INSTITUTE, INC. · PI GOLDFELD, ANNE · 2004 to 2004
$473k
NIAID NIH HHS AI065285-01A1NIAID NIH HHS AI065342NIAID NIH HHS R01 AI065285NIAID NIH HHS R21 AI060433NIAID NIH HHS R21AI060433-01NIAID NIH HHS R21 AI065342NIAID NIH HHS R56 AI065285PHS HHS P30 A060354
6 · The paper itself

Abstract

To replicate, HIV-1 capitalizes on endogenous cellular activation pathways resulting in recruitment of key host transcription factors to its viral enhancer. RNA interference has been a powerful tool for blocking key checkpoints in HIV-1 entry into cells. Here we apply RNA interference to HIV-1 transcription in primary macrophages, a major reservoir of the virus, and specifically target the transcription factor NFAT5 (nuclear factor of activated T cells 5), which is the most evolutionarily divergent NFAT protein. By molecularly cloning and sequencing isolates from multiple viral subtypes, and performing DNase I footprinting, electrophoretic mobility shift, and promoter mutagenesis transfection assays, we demonstrate that NFAT5 functionally interacts with a specific enhancer binding site conserved in HIV-1, HIV-2, and multiple simian immunodeficiency viruses. Using small interfering RNA to ablate expression of endogenous NFAT5 protein, we show that the replication of three major HIV-1 viral subtypes (B, C, and E) is dependent upon NFAT5 in human primary differentiated macrophages. Our results define a novel host factor-viral enhancer interaction that reveals a new regulatory role for NFAT5 and defines a functional DNA motif conserved across HIV-1 subtypes and representative simian immunodeficiency viruses. Inhibition of the NFAT5-LTR interaction may thus present a novel therapeutic target to suppress HIV-1 replication and progression of AIDS.

Indexed as

RNA InterferenceAcquired Immunodeficiency SyndromeCell LineCells, CulturedDisease ProgressionDNA, ViralGene Expression RegulationHeLa CellsHIV-1HumansMacrophagesProtein BindingRNA, MessengerTerminal Repeat SequencesTranscription FactorsVirus ReplicationDNA, ViralNFAT5 protein, humanRNA, MessengerTranscription Factors

Identifiers

PMID17173480
PMCPMC1698943
OpenAlexW2041113521

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.