Evidence map›Paper›PMID 17166969›Full record

ArticleJournal of clinical microbiology2007

Use of pulsed-field gel electrophoresis of conserved XbaI fragments for identification of swine Salmonella serotypes.

Stephen B Gaul, Stephanie Wedel, Matthew M Erdman, D L Harris, Isabel Turney Harris, Kathleen E Ferris, Lorraine Hoffman

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Stephen B GaulDepartment of Animal Science, Iowa State University, 11 Kildee Hall, Ames, IA 50011, USA.
Stephanie Wedel
Matthew M Erdman
D L Harris
Isabel Turney Harris
Kathleen E Ferris
Lorraine Hoffman

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Swine Salmonella isolates (n=674) from various locations throughout the United States and Canada were analyzed via pulsed-field gel electrophoresis (PFGE) with XbaI. PFGE subtypes were analyzed by cluster analysis and compared to conventional serotyping results. The analysis showed a correlation of serotype to PFGE subtype. In addition, conserved fragments were identified within the restriction patterns that were unique to each serotype. PFGE using XbaI restriction provided a possible alternative method for screening and identifying swine Salmonella serotypes.

Indexed as

Bacterial Typing TechniquesAnimalsCluster AnalysisDeoxyribonucleases, Type II Site-SpecificDNA, BacterialElectrophoresis, Gel, Pulsed-FieldSalmonellaSalmonella Infections, AnimalSerotypingSwineSwine DiseasesDeoxyribonucleases, Type II Site-SpecificDNA, Bacterialendodeoxyribonuclease XBAI

Identifiers

PMID17166969
PMCPMC1829035

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.