Evidence map›Paper›PMID 17166841›Full record

ArticleThe Journal of biological chemistry2007

Zinc induces dimerization of the class II major histocompatibility complex molecule that leads to cooperative binding to a superantigen.

Hongmin Li, Yiwei Zhao, Yi Guo, Zhong Li, Leslie Eisele, Walid Mourad

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Mining Complex Genetic Patterns Conferring Multiple Sclerosis Risk.International journal of environmental research and public health · 2021
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Structural basis for ligand recognition and activation of RAGE.Structure (London, England : 1993) · 2010
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Hongmin LiWadsworth Center, New York State Department of Health, University of Albany, State University of New York, Albany, New York 12208, USA. lih@wadsworth.org
Yiwei Zhao
Yi Guo
Zhong Li
Leslie Eisele
Walid Mourad
Wadsworth Center · USNew York State Department of Health · USCentre Hospitalier de l’Université de Montréal · CA

Funding

Superantigen-immunoreceptor interactionsR01AI050628 · NIAID · WADSWORTH CENTER · PI LI, HONGMIN · 2002 to 2004
$864k
Human endogenous retrovirus superantigen HERV-K18R21AI064637 · NIAID · WADSWORTH CENTER · PI LI, HONGMIN · 2005 to 2006
$379k
NIAID NIH HHS AI50628NIAID NIH HHS AI64637NIAID NIH HHS R01 AI050628NIAID NIH HHS R21 AI064637
6 · The paper itself

Abstract

Dimerization of class II major histocompatibility complex (MHC) plays an important role in the MHC biological function. Mycoplasma arthritidis-derived mitogen (MAM) is a superantigen that can activate large fractions of T cells bearing specific T cell receptor Vbeta elements. Here we have used structural, sedimentation, and surface plasmon resonance detection approaches to investigate the molecular interactions between MAM and the class II MHC molecule HLA-DR1 in the context of a hemagglutinin peptide-(306-318) (HA). Our results revealed that zinc ion can efficiently induce the dimerization of the HLA-DR1/HA complex. Because the crystal structure of the MAM/HLA-DR1/hemagglutinin complex in the presence of EDTA is nearly identical to the structure of the complex crystallized in the presence of zinc ion, Zn(2+) is evidently not directly involved in the binding between MAM and HLA-DR1. Sedimentation and surface plasmon resonance studies further revealed that MAM binds the HLA-DR1/HA complex with high affinity in a 1:1 stoichiometry, in the absence of Zn(2+). However, in the presence of Zn(2+), a dimerized MAM/HLA-DR1/HA complex can arise through the Zn(2+)-induced DR1 dimer. In the presence of Zn(2+), cooperative binding of MAM to the DR1 dimer was also observed.

Indexed as

Antigens, BacterialCrystallography, X-RayDimerizationHemagglutininsHistocompatibility Antigens Class IIHLA-DR1 AntigenHumansMultiprotein ComplexesMycoplasma arthritidisProtein BindingProtein ConformationSuperantigensZincAntigens, BacterialHemagglutininsHistocompatibility Antigens Class IIHLA-DR1 AntigenMultiprotein ComplexesMycoplasma arthritidis mitogenSuperantigensZinc

Identifiers

PMID17166841
PMCPMC3924565
OpenAlexW2085452430

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.