Evidence map›Paper›PMID 17164476›Full record

ArticleRNA (New York, N.Y.)2007

Autoregulation of GLD-2 cytoplasmic poly(A) polymerase.

Labib Rouhana, Marvin Wickens

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Auto-regulatory feedback by RNA-binding proteins.Journal of molecular cell biology · 2019
    Review
  3. Terminal nucleotidyl transferases (TENTs) in mammalian RNA metabolism.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Time of day regulates subcellular trafficking, tripartite synaptic localization, and polyadenylation of the astrocytic Fabp7 mRNA.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
    Article
  10. Review
  11. GLD-2/RNP-8 cytoplasmic poly(A) polymerase is a broad-spectrum regulator of the oogenesis program.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  12. Article
  13. Article
  14. GLD2 poly(A) polymerase is required for long-term memory.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  15. Review
  16. Review
  17. A family of poly(U) polymerases.RNA (New York, N.Y.) · 2007
    Article
  18. Specificity factors in cytoplasmic polyadenylation.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Labib RouhanaDepartment of Biochemistry, Laboratory of Genetics, University of Wisconsin-Madison 53706, USA.
Marvin Wickens
University of Wisconsin–Madison · US

Funding

FUNCTION OF POLY(A) AND 3'UTRSR01GM050942 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WICKENS, MARVIN P. · 1994 to 2020
$8.3M
Cleavage, polyadenylation, and transport of mRNAR37GM031892 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WICKENS, MARVIN P. · 2003 to 2012
$3.5M
CLEAVAGE, POLYADENYLATION, AND TRANSPORT OF MRNAR01GM031892 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI WICKENS, MARVIN P. · 1985 to 2000
$278k
NIGMS NIH HHS GM31892NIGMS NIH HHS GM50942NIGMS NIH HHS R01 GM031892NIGMS NIH HHS R01 GM050942NIGMS NIH HHS R37 GM031892
6 · The paper itself

Abstract

Cytoplasmic polyadenylation regulates mRNA stability and translation and is required for early development and synaptic plasticity. The GLD-2 poly(A) polymerase catalyzes cytoplasmic polyadenylation in the germline of metazoa. Among vertebrates, the enzyme is encoded by two isoforms of mRNA that differ only in the length of their 3'-UTRs. Here we focus on regulation of vertebrate GLD-2 mRNA. We show that the 3'-UTR of GLD-2 mRNA elicits its own polyadenylation and translational activation during frog oocyte maturation. We identify the sequence elements responsible for repression and activation, and demonstrate that CPEB and PUF proteins likely mediate repression in the resting oocyte. Regulated polyadenylation of GLD-2 mRNA is conserved, as are the key regulatory elements. Poly(A) tails of GLD-2 mRNA increase in length in the brain in response to neuronal stimulation, suggesting that a comparable system exists in that tissue. We propose a positive feedback circuit in which translation of GLD-2 mRNA is stimulated by its polyadenylation, thereby reinforcing the switch to polyadenylate and activate batteries of mRNAs.

Indexed as

3' Untranslated RegionsAnimalsBase SequenceBrainCytoplasmDNA Mutational AnalysisFeedbackFemaleGene Expression Regulation, DevelopmentalHumansMaleMolecular Sequence DataOocytesPolyadenylationPolynucleotide AdenylyltransferaseRNA 3' End Processing3' Untranslated RegionsGLD-2 protein, XenopusPolynucleotide AdenylyltransferaseRNA, Messenger

Identifiers

PMID17164476
PMCPMC1781367
OpenAlexW2120006924

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.