Evidence map›Paper›PMID 17161423›Full record

ArticleJournal of molecular biology2007

Structural analysis of the plakin domain of bullous pemphigoid antigen1 (BPAG1) suggests that plakins are members of the spectrin superfamily.

Julius J Jefferson, Carlo Ciatto, Lawrence Shapiro, Ronald K H Liem

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. The role of MACF1 in nervous system development and maintenance.Seminars in cell & developmental biology · 2017
    Review
  6. Overview of the Muscle Cytoskeleton.Comprehensive Physiology · 2017
    Review
  7. Novel mutations inNeurology · 2017
    Article
  8. Intermediate Filaments and the Plasma Membrane.Cold Spring Harbor perspectives in biology · 2017
    Review
  9. Cytoskeletal Integrators: The Spectrin Superfamily.Cold Spring Harbor perspectives in biology · 2016
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Julius J JeffersonDepartment of Pathology and Cell Biology, Columbia University College of Physicians and Surgeons, New York, NY 10032, USA.
Carlo Ciatto
Lawrence Shapiro
Ronald K H Liem
Columbia University · US

Funding

MOLECULAR BASIS OF CADHERIN MEDIATED CELL ADHESIONR01GM062270 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI SHAPIRO, LAWRENCE S · 2001 to 2015
$3.4M
Mechanism of neurodegeneration in dystonia musculorumR01NS047711 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LIEM, RONALD K · 2004 to 2007
$1.4M
NIGMS NIH HHS GM 62270NIGMS NIH HHS R01 GM062270NINDS NIH HHS NS 47711NINDS NIH HHS R01 NS047711
6 · The paper itself

Abstract

Bullous pemphigoid antigen 1 (BPAG1) is a member of the plakin family of proteins. The plakins are multi-domain proteins that have been shown to interact with microtubules, actin filaments and intermediate filaments, as well as proteins found in cellular junctions. These interactions are mediated through different domains on the plakins. The interactions between plakins and components of specialized cell junctions such as desmosomes and hemidesmosomes are mediated through the so-called plakin domain, which is a common feature of the plakins. We report the crystal structure of a stable fragment from BPAG1, residues 226-448, defined by limited proteolysis of the whole plakin domain. The structure, determined by single-wavelength anomalous diffraction phasing from a selenomethionine-substituted crystal at 3.0 A resolution, reveals a tandem pair of triple helical bundles closely related to spectrin repeats. Based on this structure and analysis of sequence conservation, we propose that the architecture of plakin domains is defined by two pairs of spectrin repeats interrupted by a putative Src-Homology 3 (SH3) domain.

Indexed as

Amino Acid SequenceAnimalsCarrier ProteinsCrystallizationCrystallography, X-RayCytoskeletal ProteinsDystoninHumansMiceModels, MolecularMolecular Sequence DataNerve Tissue ProteinsPlakinsProtein Structure, SecondaryProtein Structure, TertiarySequence Homology, Amino AcidCarrier ProteinsCytoskeletal ProteinsDST protein, humanDystoninNerve Tissue ProteinsPlakinsSpectrin

Identifiers

PMID17161423
PMCPMC1850962
OpenAlexW2068047624

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.