Evidence map›Paper›PMID 17160901›Full record

ArticleAmerican journal of human genetics2007

An absence of cutaneous neurofibromas associated with a 3-bp inframe deletion in exon 17 of the NF1 gene (c.2970-2972 delAAT): evidence of a clinically significant NF1 genotype-phenotype correlation.

M Upadhyaya, S M Huson, M Davies, N Thomas, N Chuzhanova, S Giovannini, D G Evans, E Howard, B Kerr, S Griffiths and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 158 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
158citing papers in PubMed, 2 pooled it
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

158 citing papers in PubMed, 2 syntheses or guidelines pooled it, 360 citations in OpenAlex.

  1. Guideline
  2. Guideline
  3. Article
  4. Review
  5. Observational
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Clinical signs and genetic evaluation of patients with neurofibromatosis type 1 with and without optic pathway gliomas in a center in Turkey.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2024
    Article
  17. Article
  18. Review
  19. Article
  20. The Contribution of Oxidative Stress toAntioxidants (Basel, Switzerland) · 2023
    Review

98 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 14 institutions in 6 countries.

M UpadhyayaInstitute of Medical Genetics, Cardiff University, Cardiff, CF14 4XN, UK. Upadhyaya@cardiff.ac.uk
S M Huson
M Davies
N Thomas
N Chuzhanova
S Giovannini
D G Evans
E Howard
B Kerr
S Griffiths
C Consoli
L Side
D Adams
M Pierpont
R Hachen
A Barnicoat
H Li
P Wallace
J P Van Biervliet
D Stevenson
D Viskochil
D Baralle
E Haan
V Riccardi
P Turnpenny
C Lazaro
L Messiaen
Nuovo Ospedale San Giovanni di Dio · ITCardiff University · GBThe University of Adelaide · AUAddenbrooke's Hospital · GBAlbany Medical Center Hospital · USAZ Sint-Jan · BEChildren's Hospital of Philadelphia · USChurchill Hospital · GBInstitut Català d'Oncologia · ESRoyal Devon and Exeter Hospital · GBSt Mary's Hospital · GBTexas Neurofibromatosis Foundation · USUniversity of Alabama at Birmingham · USUniversity of London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neurofibromatosis type 1 (NF1) is characterized by cafe-au-lait spots, skinfold freckling, and cutaneous neurofibromas. No obvious relationships between small mutations (<20 bp) of the NF1 gene and a specific phenotype have previously been demonstrated, which suggests that interaction with either unlinked modifying genes and/or the normal NF1 allele may be involved in the development of the particular clinical features associated with NF1. We identified 21 unrelated probands with NF1 (14 familial and 7 sporadic cases) who were all found to have the same c.2970-2972 delAAT (p.990delM) mutation but no cutaneous neurofibromas or clinically obvious plexiform neurofibromas. Molecular analysis identified the same 3-bp inframe deletion (c.2970-2972 delAAT) in exon 17 of the NF1 gene in all affected subjects. The Delta AAT mutation is predicted to result in the loss of one of two adjacent methionines (codon 991 or 992) ( Delta Met991), in conjunction with silent ACA-->ACG change of codon 990. These two methionine residues are located in a highly conserved region of neurofibromin and are expected, therefore, to have a functional role in the protein. Our data represent results from the first study to correlate a specific small mutation of the NF1 gene to the expression of a particular clinical phenotype. The biological mechanism that relates this specific mutation to the suppression of cutaneous neurofibroma development is unknown.

Indexed as

AdolescentAdultChildExonsFemaleGenotypeHumansMaleMiddle AgedNeurofibromaNeurofibromatosis 1Neurofibromin 1PedigreePhenotypeSequence Analysis, DNASequence DeletionNeurofibromin 1

Identifiers

PMID17160901
PMCPMC1785321
OpenAlexW2044976670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.