Evidence map›Paper›PMID 17158738›Full record

ArticleEukaryotic cell2007

Small-subunit rRNA processome proteins are translationally regulated during differentiation of Trypanosoma cruzi.

Sheila Cristina Nardelli, Andréa Rodrigues Avila, Aline Freund, Maria Cristina Motta, Lauro Manhães, Teresa Cristina Leandro de Jesus, Sergio Schenkman, Stenio Perdigão Fragoso, Marco Aurélio Krieger, Samuel Goldenberg and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Metacyclogenesis as the Starting Point of Chagas Disease.International journal of molecular sciences · 2023
    Review
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  13. Gene expression in trypanosomatid parasites.Journal of biomedicine & biotechnology · 2010
    Review
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Sheila Cristina NardelliInstituto de Biologia Molecular do Paraná, Rua Algacyr Munhoz Mader 3775, Curitiba 81350-010, Paraná, Brazil.
Andréa Rodrigues Avila
Aline Freund
Maria Cristina Motta
Lauro Manhães
Teresa Cristina Leandro de Jesus
Sergio Schenkman
Stenio Perdigão Fragoso
Marco Aurélio Krieger
Samuel Goldenberg
Bruno Dallagiovanna
Instituto de Biologia Molecular do Paraná · BRFundação Oswaldo Cruz · BRUniversidade Federal de São Paulo · BRInstituto de Biofísica Carlos Chagas Filho

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We used differential display to select genes differentially expressed during differentiation of epimastigotes into metacyclic trypomastigotes in the protozoan parasite Trypanosoma cruzi. One of the selected clones had a sequence similar to that of the small-subunit (SSU) processome protein Sof1p, which is involved in rRNA processing. The corresponding T. cruzi protein, TcSof1, displayed a nuclear localization and is downregulated during metacyclogenesis. Heterologous RNA interference assays showed that depletion of this protein impaired growth but did not affect progression through the cell cycle, suggesting that ribosome synthesis regulation and the cell cycle are uncoupled in this parasite. Quantitative PCR (qPCR) assays of several SSU processome-specific genes in T. cruzi also showed that most of them were regulated posttranscriptionally. This process involves the accumulation of mRNA in the polysome fraction of metacyclic trypomastigotes, where TcSof1 cannot be detected. Metacyclic trypomastigote polysomes were purified and separated by sucrose gradient sedimentation. Northern blot analysis of the sucrose gradient fractions showed the association of TcSof1 mRNA with polysomes, confirming the qPCR data. The results suggest that the mechanism of regulation involves the blocking of translation elongation and/or termination.

Indexed as

Cell DifferentiationGene Expression RegulationProtein BiosynthesisAnimalsBlotting, NorthernFluorescent Antibody TechniqueGene Expression ProfilingImmunoprecipitationMutationProtozoan ProteinsReverse Transcriptase Polymerase Chain ReactionRibonucleoproteins, Small NuclearRNA, MessengerRNA PrecursorsRNA, ProtozoanRNA, RibosomalProtozoan ProteinsRibonucleoproteins, Small NuclearRNA, MessengerRNA PrecursorsRNA, ProtozoanRNA, RibosomalSaccharomyces cerevisiae ProteinsSOF1 protein, S cerevisiae

Identifiers

PMID17158738
PMCPMC1797946
OpenAlexW2133887759

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.