Evidence map›Paper›PMID 17157937›Full record

ArticleBiochimica et biophysica acta2007

The Saccharomyces cerevisiae YFR041C/ERJ5 gene encoding a type I membrane protein with a J domain is required to preserve the folding capacity of the endoplasmic reticulum.

M Carla Famá, David Raden, Nicolás Zacchi, Darío R Lemos, Anne S Robinson, Susana Silberstein

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

M Carla FamáIBYF-CONICET, Cátedra de Microbiología, Facultad de Agronomía, Universidad de Buenos Aires, Avda. San Martín 4453, C1417DSE Buenos Aires, Argentina.
David Raden
Nicolás Zacchi
Darío R Lemos
Anne S Robinson
Susana Silberstein
Consejo Nacional de Investigaciones Científicas y Técnicas · ARUniversity of Delaware · US

Funding

Stochastic Modeling of Protein Interactions in the ERR01GM075297 · NIGMS · UNIVERSITY OF DELAWARE · PI ROBINSON, ANNE SKAJA · 2005 to 2008
$914k
Sensing and Analyzing Stress During Protein ExpressionR01GM065507 · NIGMS · UNIVERSITY OF DELAWARE · PI ROBINSON, ANNE SKAJA · 2002 to 2004
$620k
NIGMS NIH HHS R01 GM065507NIGMS NIH HHS R01 GM075297
6 · The paper itself

Abstract

YFR041C/ERJ5 was identified in Saccharomyces cerevisiae as a gene regulated by the unfolded protein response pathway (UPR). The open reading frame of the gene has a J domain characteristic of the DnaJ chaperone family of proteins that regulate the activity of Hsp70 chaperones. We determined the expression and topology of Erj5p, a type I membrane protein with a J domain in the lumen of the endoplasmic reticulum (ER) that colocalizes with Kar2p, the major Hsp70 in the yeast ER. We identified synthetic interactions of Deltaerj5 with mutations in genes involved in protein folding in the ER (kar2-159, Deltascj1Deltajem1) and in the induction of the unfolded protein response (Deltaire1). Loss of Erj5p in yeast cells with impaired ER protein folding capacity increased sensitivity to agents that cause ER stress. We identified the ERJ5 mRNA and confirmed that agents that promote accumulation of misfolded proteins in the ER regulate its abundance. We found that loss of the non-essential ERJ5 gene leads to a constitutively induced UPR, indicating that ERJ5 is required for maintenance of an optimal folding environment in the yeast ER.

Indexed as

Protein FoldingAllelesAmino Acid SequenceBlotting, NorthernEndoplasmic ReticulumGene DeletionGene Expression Regulation, FungalGenes, FungalHSP40 Heat-Shock ProteinsMembrane ProteinsMolecular ChaperonesMolecular Sequence DataProtein Structure, TertiaryRecombinant Fusion ProteinsRNA, MessengerSaccharomyces cerevisiaeErj5 protein, S cerevisiaeHSP40 Heat-Shock ProteinsMembrane ProteinsMolecular ChaperonesRecombinant Fusion ProteinsRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID17157937
PMCPMC1847348
OpenAlexW1977440444

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.