Evidence map›Paper›PMID 17157249›Full record

ArticleMolecular cell2006

Recognition of a functional peroxisome type 1 target by the dynamic import receptor pex5p.

Will A Stanley, Fabian V Filipp, Petri Kursula, Nicole Schüller, Ralf Erdmann, Wolfgang Schliebs, Michael Sattler, Matthias Wilmanns

Abstract readComparative Study
In one paragraph

Article in Molecular cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Mammalian pexophagy at a glance.Journal of cell science · 2024
    Review
  7. Article
  8. Article
  9. Computational Evaluation of Peroxisomal Targeting Signals in Metazoa.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Nuclear and peroxisomal targeting of catalase.Plant, cell & environment · 2022
    Article
  16. Article
  17. Translating theFrontiers in cell and developmental biology · 2022
    Review
  18. Article
  19. Article
  20. Membrane Interactions of the Peroxisomal Proteins PEX5 and PEX14.Frontiers in cell and developmental biology · 2021
    Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Will A StanleyEuropean Molecular Biology Laboratory-Hamburg Outstation, Notkestrasse 85, 22603 Hamburg.
Fabian V FilippStructural and Computational Biology Unit, European Molecular Biology Laboratory-Heidelberg, Meyerhofstrasse 1, 69117 Heidelberg.
Petri KursulaEuropean Molecular Biology Laboratory-Hamburg Outstation, Notkestrasse 85, 22603 Hamburg.
Nicole SchüllerEuropean Molecular Biology Laboratory-Hamburg Outstation, Notkestrasse 85, 22603 Hamburg.
Ralf ErdmannDepartment of Systems Biology, Institute for Physiological Chemistry, Faculty of Medicine, Ruhr University of Bochum, 44780 Bochum, Germany.
Wolfgang SchliebsDepartment of Systems Biology, Institute for Physiological Chemistry, Faculty of Medicine, Ruhr University of Bochum, 44780 Bochum, Germany.
Michael SattlerStructural and Computational Biology Unit, European Molecular Biology Laboratory-Heidelberg, Meyerhofstrasse 1, 69117 Heidelberg.
Matthias WilmannsEuropean Molecular Biology Laboratory-Hamburg Outstation, Notkestrasse 85, 22603 Hamburg. Electronic address: wilmanns@embl-hamburg.de.

Funding

Tumor pyruvate kinase as key regulator of cancer metabolismR00CA154887 · NCI · UNIVERSITY OF CALIFORNIA, MERCED · PI FILIPP, FABIAN VOLKER · 2012 to 2014
$725k
NCI NIH HHS R00 CA154887
6 · The paper itself

Abstract

Peroxisomes require the translocation of folded and functional target proteins of various sizes across the peroxisomal membrane. We have investigated the structure and function of the principal import receptor Pex5p, which recognizes targets bearing a C-terminal peroxisomal targeting signal type 1. Crystal structures of the receptor in the presence and absence of a peroxisomal target, sterol carrier protein 2, reveal major structural changes from an open, snail-like conformation into a closed, circular conformation. These changes are caused by a long loop C terminal to the 7-fold tetratricopeptide repeat segments. Mutations in residues of this loop lead to defects in peroxisomal import in human fibroblasts. The structure of the receptor/cargo complex demonstrates that the primary receptor-binding site of the cargo is structurally and topologically autonomous, enabling the cargo to retain its native structure and function.

Indexed as

Amino Acid SequenceBinding SitesCrystallography, X-RayHumansModels, MolecularMolecular Sequence DataPeroxisomesPeroxisome-Targeting Signal 1 ReceptorProtein ConformationProtein FoldingProtein Structure, TertiaryProtein TransportReceptors, Cytoplasmic and NuclearPeroxisome-Targeting Signal 1 ReceptorReceptors, Cytoplasmic and Nuclear

Identifiers

PMID17157249
PMCPMC5030714

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.