Evidence map›Paper›PMID 17156473›Full record

ArticleMolecular cancer2006

Effect of ret/PTC 1 rearrangement on transcription and post-transcriptional regulation in a papillary thyroid carcinoma model.

Susanne Cahill, Paul Smyth, Stephen P Finn, Karen Denning, Richard Flavin, Esther M O'Regan, Jinghuan Li, Astrid Potratz, Simone M Guenther, Richard Henfrey and 2 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Molecular cancer, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Review
  3. Scenario and future prospects of microRNAs in gastric cancer: A review.Iranian journal of basic medical sciences · 2019
    Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
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  10. Review
  11. Article
  12. Article
  13. MicroRNA deep-sequencing reveals master regulators of follicular and papillary thyroid tumors.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2015
    Article
  14. Role of microRNAs in gastric cancer.World journal of gastroenterology · 2014
    Review
  15. Review
  16. Review
  17. MicroRNA expression profiles in differentiated thyroid cancer, a review.International journal of clinical and experimental medicine · 2013
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Susanne CahillDept. of Histopathology, University of Dublin, Trinity College, Dublin, Ireland. sucahill@tcd.ie
Paul Smyth
Stephen P Finn
Karen Denning
Richard Flavin
Esther M O'Regan
Jinghuan Li
Astrid Potratz
Simone M Guenther
Richard Henfrey
John J O'Leary
Orla Sheils
Trinity College Dublin · IEDublin Dental University Hospital · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundmicroRNAs (miRNAs) are a group of non-coding single stranded RNAs measuring approximately 22 nt in length that have been found to control cell growth, differentiation and apoptosis. miRNAs negatively regulate their target genes and recently have been implicated in tumourigenesis. Furthermore, miRNA expression profiling correlates with various cancers, with these genes thought to act as both tumour suppressors and oncogenes. ret/PTC 1 is an oncogene with constitutive kinase activity implicated in the development of papillary thyroid carcinoma (PTC). This rearrangement leads to aberrant MAPK activation that is implicated in PTC tumourigenesis.

aimThe aim of this study was to identify the effect that ret/PTC 1 has on transcription and post-transcriptional regulation in PTC by using DNA microarray and microRNA analysis.

resultsDNA microarray analysis revealed a group of genes differentially expressed between normal thyroid cell lines and those harbouring a ret/PTC 1 rearrangement.Furthermore, a unique miRNA expression signature differentiated between PTC cell lines with ret/PTC 1 and a normal thyroid cell line. 21 miRNAs showed significant overexpression and 14 miRNAs showed underexpression in these cell lines when compared to normal thyroid. Several of these up/down regulated miRNAs may be involved in PTC pathogenesis.

Indexed as

RNA Processing, Post-TranscriptionalTranscription, GeneticBiomarkers, TumorCarcinoma, PapillaryCell Line, TumorGene Expression ProfilingGene RearrangementHumansMicroRNAsOligonucleotide Array Sequence AnalysisOncogene Proteins, FusionProtein-Tyrosine KinasesReverse Transcriptase Polymerase Chain ReactionRNA, MessengerThyroid NeoplasmsBiomarkers, TumorMicroRNAsOncogene Proteins, FusionProtein-Tyrosine Kinasesret-PTC fusion oncoproteins, humanRNA, Messenger

Identifiers

PMID17156473
PMCPMC1713250
OpenAlexW1956768647

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.