Evidence map›Paper›PMID 17154718›Full record

ArticlePLoS genetics2006

Drosophila SPF45: a bifunctional protein with roles in both splicing and DNA repair.

Ahmad Sami Chaouki, Helen K Salz

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Xio is a component of theProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  4. Article
  5. The mNature communications · 2017
    Article
  6. Review
  7. spenito is required for sex determination in Drosophila melanogaster.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  8. Review
  9. Article
  10. Article
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  12. Review
  13. Article
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ahmad Sami ChaoukiDepartment of Genetics, School of Medicine, Case Western Reserve University, Cleveland, Ohio, United States of America.
Helen K Salz
Case Western Reserve University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007250 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, ALEX YEE-CHEN · 1985 to 2023
$33.4M
TRAINING IN NORMAL AND ABNORMAL DEVELOPMENTT32HD007104 · NICHD · CASE WESTERN RESERVE UNIVERSITY · PI HARTE, PETER J. · 1985 to 2010
$3.5M
Regulation of Sex-lethal pre-mRNA splicing during Drosophila developmentR01GM061039 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI SALZ, HELEN KAREN · 2002 to 2010
$2.5M
NICHD NIH HHS T32 HD007104NICHD NIH HHS T32-HD07104NIGMS NIH HHS R01 GM061039NIGMS NIH HHS R01-GM61039NIGMS NIH HHS T32 GM007250NIGMS NIH HHS T32-GM07250
6 · The paper itself

Abstract

The sequence of the SPF45 protein is significantly conserved, yet functional studies have identified it as a splicing factor in animal cells and as a DNA-repair protein in plants. Using a combined genetic and biochemical approach to investigate this apparent functional discrepancy, we unify and validate both of these studies by demonstrating that the Drosophila melanogaster protein is bifunctional, with independent functions in DNA repair and splicing. We find that SPF45 associates with the U2 snRNP and that mutations that remove the C-terminal end of the protein disrupt this interaction. Although animals carrying this mutation are viable, they are nevertheless compromised in their ability to regulate Sex-lethal splicing, demonstrating that Sex-lethal is an important physiological target of SPF45. Furthermore, these mutant animals exhibit phenotypes diagnostic of difficulties in recovering from exogenously induced DNA damage. The conclusion that SPF45 functions in the DNA-repair pathway is strengthened by finding both genetic and physical interactions between SPF45 and RAD201, a previously uncharacterized member of the RecA/Rad51 protein family. Together with our finding that the fly SPF45 protein increases the survival rate of mutagen-treated bacteria lacking the RecG helicase, these studies provide the tantalizing suggestion that SPF45 has an ancient and evolutionarily conserved role in DNA repair.

Indexed as

RNA SplicingAmino Acid SequenceAnimalsDNADNA RepairDrosophila melanogasterDrosophila ProteinsExonsHeterochromatinModels, GeneticMolecular Sequence DataRibonucleoprotein, U2 Small NuclearRNA-Binding ProteinsRNA Splicing FactorsDNADrosophila ProteinsHeterochromatinRAD201 protein, DrosophilaRibonucleoprotein, U2 Small NuclearRNA-Binding ProteinsRNA Splicing FactorsSPF45 protein, DrosophilaSxl protein, Drosophila

Identifiers

PMID17154718
PMCPMC1687153
OpenAlexW2069141227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.