Evidence map›Paper›PMID 17151082›Full record

ArticleNucleic acids research2007

Hedgehog Signaling Pathway Database: a repository of current annotation efforts and resources for the Hh research community.

Kieran Hervold, Andrew Martin, Roger A Kirkpatrick, Paul F Mc Kenna, F A Ramirez-Weber

Abstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kieran HervoldDepartment of biology, Cell and Biology Group and Center for Computing in Life Sciences, San Francisco State University, 1600 Holloway Avenue, 738 Hensill Hall, San Francisco, CA 94132, USA.
Andrew Martin
Roger A Kirkpatrick
Paul F Mc Kenna
F A Ramirez-Weber

Funding

TOXIC METALS IN PLANTS--METAL INDUCED GENE EXPRESSION IN METAL TOLERANT PLANTSS06GM052588 · NIGMS · SAN FRANCISCO STATE UNIVERSITY · PI MARQUEZ-MAGANA, LETICIA MARIA · 1995 to 2010
$31.2M
Sqt1p, important regulator of the kinetochore complexesP20MD000262 · NIMHD · SAN FRANCISCO STATE UNIVERSITY · PI CORRIGAN, ROBERT · 2002 to 2006
$5.0M
SFSU/UCSF Comprehensive cancer Partnership ProgramU56CA096217 · NCI · SAN FRANCISCO STATE UNIVERSITY · PI MACHER, BRUCE A. · 2002 to 2008
$2.5M
NCI NIH HHS U56 CA096217NCI NIH HHS U56 CA 96217NIGMS NIH HHS S06 GM052588NIGMS NIH HHS S06 GM52588NIMHD NIH HHS P20 MD000262
6 · The paper itself

Abstract

The Hedgehog Signaling Pathway Database is a curated repository of information pertaining to the Hedgehog developmental pathway. It was designed to provide centralized access to a wide range of relevant information in an organism-agnostic manner. Data are provided for all genes and gene targets known to be involved in the Hh pathway across various organisms. The data provided include DNA and protein sequences as well as domain structure motifs. All known human diseases associated with the Hh pathway are indexed including experimental data on therapeutic agents and their molecular targets. Hh researchers will find useful information on relevant protocols, tissue cell lines and reagents used in current Hh research projects. Curated content is also provided for publications, grants and patents relating to the Hh pathway. The database can be accessed at http://www.hedgehog.sfsu.edu.

Indexed as

Databases, GeneticSignal TransductionAnimalsGenesGenetic Diseases, InbornHedgehog ProteinsHumansInternetMiceRatsUser-Computer InterfaceHedgehog Proteins

Identifiers

PMID17151082
PMCPMC1781108

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.