ArticleNucleic acids research2007
PEDANT genome database: 10 years online.
Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
13 citing papers in PubMed.
- Cold-induced secondary dormancy and its regulatory mechanisms in Beta vulgaris.Plant, cell & environment · 2022Article
- EnzymeDetector: an integrated enzyme function prediction tool and database.BMC bioinformatics · 2011Article
- Binary classification of protein molecules into intrinsically disordered and ordered segments.BMC structural biology · 2011Article
- Shewanella knowledgebase: integration of the experimental data and computational predictions suggests a biological role for transcription of intergenic regions.Database : the journal of biological databases and curation · 2010Article
- SiPaGene: A new repository for instant online retrieval, sharing and meta-analyses of GeneChip expression data.BMC genomics · 2009Article
- The GTOP database in 2009: updated content and novel features to expand and deepen insights into protein structures and functions.Nucleic acids research · 2009Article
- Uncovering metabolic pathways relevant to phenotypic traits of microbial genomes.Genome biology · 2009Article
- Genome information management and integrated data analysis with HaloLex.Archives of microbiology · 2008Article
- MIPS: analysis and annotation of genome information in 2007.Nucleic acids research · 2008Article
- SIMAP--structuring the network of protein similarities.Nucleic acids research · 2008Article
- The fungus Ustilago maydis and humans share disease-related proteins that are not found in Saccharomyces cerevisiae.BMC genomics · 2007Article
- Applying negative rule mining to improve genome annotation.BMC bioinformatics · 2007Article
- Restauro-G: a rapid genome re-annotation system for comparative genomics.Genomics, proteomics & bioinformatics · 2007Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The PEDANT genome database provides exhaustive annotation of 468 genomes by a broad set of bioinformatics algorithms. We describe recent developments of the PEDANT Web server. The all-new Graphical User Interface (GUI) implemented in Javatrade mark allows for more efficient navigation of the genome data, extended search capabilities, user customization and export facilities. The DNA and Protein viewers have been made highly dynamic and customizable. We also provide Web Services to access the entire body of PEDANT data programmatically. Finally, we report on the application of association rule mining for automatic detection of potential annotation errors. PEDANT is freely accessible to academic users at http://pedant.gsf.de.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.