Evidence map›Paper›PMID 17146677›Full record

ArticlePflugers Archiv : European journal of physiology2007

Optimized expression vector for ion channel studies in Xenopus oocytes and mammalian cells using alfalfa mosaic virus.

Srinivasan P Venkatachalan, Jeremy D Bushman, José L Mercado, Feyza Sancar, Kelly R Christopherson, Andrew J Boileau

Open access · greenAbstract read
In one paragraph

Article in Pflugers Archiv : European journal of physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 58 citations in OpenAlex.

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  13. Isoflurane Potentiation of GABAInternational journal of molecular sciences · 2020
    Article
  14. Structural basis for allosteric transitions of a multidomain pentameric ligand-gated ion channel.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Bipolar switching by HCN voltage sensor underlies hyperpolarization activation.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  19. A selective class of inhibitors for the CLC-Ka chloride ion channel.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Srinivasan P VenkatachalanDepartment of Physiology, University of Wisconsin-Madison, 601 Science Drive, Madison, WI 53711, USA.
Jeremy D Bushman
José L Mercado
Feyza Sancar
Kelly R Christopherson
Andrew J Boileau
University of Wisconsin–Madison · US

Funding

STRUCTURE OF THE GABA A RECEPTOR BINDING SITESR01NS034727 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI CZAJKOWSKI, CYNTHIA M · 1997 to 2016
$6.1M
Benzodiazepine Modulation of GABAa Receptor KineticsR01MH066406 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI CZAJKOWSKI, CYNTHIA M · 2002 to 2006
$1.3M
Structure of the GABA-A Receptor Binding SitesR56NS034727 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI CZAJKOWSKI, CYNTHIA M · 2012 to 2012
$513k
NIMH NIH HHS MH 66406NIMH NIH HHS R01 MH066406NINDS NIH HHS NS 34727NINDS NIH HHS R01 NS034727NINDS NIH HHS R56 NS034727
6 · The paper itself

Abstract

Plasmid vectors used for mammalian expression or for in vitro cRNA translation can differ substantially and are rarely cross-compatible. To make comparisons between mammalian and Xenopus oocyte expression systems, it would be advantageous to use a single vector without the need for shuttle vectors or subcloning. We have designed such a vector, designated pUNIV for universal, with elements that will allow for in vitro or ex vivo expression in multiple cell types. We tested the expression of pUNIV-based cDNA cassettes using enhanced green fluorescent protein and two forms of the type A gamma-aminobutyric acid receptor (GABA(A)R) and compared pUNIV to vectors optimized for expression in either Xenopus oocytes or mammalian cells. In HEK293 cells, radioligand binding was robust, and patch clamp experiments showed that subtle macroscopic GABA(A)R kinetics were indistinguishable from our previous results. In Xenopus oocytes, agonist median effective concentration measurements matched previous work using a vector optimized for oocyte expression. Furthermore, we found that expression using pUNIV was significantly enhanced in oocytes and was remarkably long-lasting in both systems.

Indexed as

Genetic VectorsAlfalfa mosaic virusAnimalsCell LineFluorescent DyesGene Transfer TechniquesGreen Fluorescent ProteinsHumansIon ChannelsKidneyKineticsOocytesPatch-Clamp TechniquesPlasmidsProtein IsoformsRadioligand Assayenhanced green fluorescent proteinFluorescent DyesGreen Fluorescent ProteinsIon ChannelsProtein IsoformsReceptors, GABA-A

Identifiers

PMID17146677
PMCPMC2574422
OpenAlexW2098831843

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.