Evidence map›Paper›PMID 17145710›Full record

ArticleNucleic acids research2007

IntAct--open source resource for molecular interaction data.

S Kerrien, Y Alam-Faruque, B Aranda, I Bancarz, A Bridge, C Derow, E Dimmer, M Feuermann, A Friedrichsen, R Huntley and 14 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 376 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
376citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

376 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Identification of Aberrant Chromosomal Regions in Human Breast Cancer Using Gene Expression Data and Related Gene Information.Medical science monitor : international medical journal of experimental and clinical research · 2015
    Pooled it
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  6. Cell-cell communication: new insights and clinical implications.Signal transduction and targeted therapy · 2024
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  8. AI approaches for the discovery and validation of drug targets.Cambridge prisms. Precision medicine · 2024
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  11. Use ofHeliyon · 2023
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  15. Finding New Ways How to Control BACE1.The Journal of membrane biology · 2022
    Article
  16. Article
  17. Article
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  20. Article

316 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

S KerrienEMBL Outstation-European Bioinformatics Institute (EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. skerrien@ebi.ac.uk
Y Alam-Faruque
B Aranda
I Bancarz
A Bridge
C Derow
E Dimmer
M Feuermann
A Friedrichsen
R Huntley
C Kohler
J Khadake
C Leroy
A Liban
C Lieftink
L Montecchi-Palazzi
S Orchard
J Risse
K Robbe
B Roechert
D Thorneycroft
Y Zhang
R Apweiler
H Hermjakob

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

IntAct is an open source database and software suite for modeling, storing and analyzing molecular interaction data. The data available in the database originates entirely from published literature and is manually annotated by expert biologists to a high level of detail, including experimental methods, conditions and interacting domains. The database features over 126,000 binary interactions extracted from over 2100 scientific publications and makes extensive use of controlled vocabularies. The web site provides tools allowing users to search, visualize and download data from the repository. IntAct supports and encourages local installations as well as direct data submission and curation collaborations. IntAct source code and data are freely available from http://www.ebi.ac.uk/intact.

Indexed as

Databases, GeneticDNAInternetProtein Interaction MappingProteinsProtein Structure, TertiaryQuality ControlRNASoftwareUser-Computer InterfaceVocabulary, ControlledDNAProteinsRNA

Identifiers

PMID17145710
PMCPMC1751531

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.