Evidence map›Paper›PMID 17141728›Full record

ArticleArchives of biochemistry and biophysics2007

Formation of methionine sulfoxide during glycoxidation and lipoxidation of ribonuclease A.

Jonathan W C Brock, Jennifer M Ames, Suzanne R Thorpe, John W Baynes

Open access · greenAbstract read
In one paragraph

Article in Archives of biochemistry and biophysics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 15 citations in OpenAlex.

  1. Method for Quantifying Oxidized Methionines and Application to HIV-1 Env.Journal of the American Society for Mass Spectrometry · 2018
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Jonathan W C BrockDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA.
Jennifer M Ames
Suzanne R Thorpe
John W Baynes
University of South Carolina · USQueen's University Belfast · GB

Funding

GLYCATION OF PROTEINS IN DIABETESR37DK019971 · NIDDK · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI BAYNES, JOHN WILLIAM · 1986 to 2010
$3.6M
NIDDK NIH HHS R37 DK019971
6 · The paper itself

Abstract

Chemical modification of proteins by reactive oxygen species affects protein structure, function and turnover during aging and chronic disease. Some of this damage is direct, for example by oxidation of amino acids in protein by peroxide or other reactive oxygen species, but autoxidation of ambient carbohydrates and lipids amplifies both the oxidative and chemical damage to protein and leads to formation of advanced glycoxidation and lipoxidation end-products (AGE/ALEs). In previous work, we have observed the oxidation of methionine during glycoxidation and lipoxidation reactions, and in the present work we set out to determine if methionine sulfoxide (MetSO) in protein was a more sensitive indicator of glycoxidative and lipoxidative damage than AGE/ALEs. We also investigated the sites of methionine oxidation in a model protein, ribonuclease A (RNase), in order to determine whether analysis of the site specificity of methionine oxidation in proteins could be used to indicate the source of the oxidative damage, i.e. carbohydrate or lipid. We describe here the development of an LC/MS/MS for quantification of methionine oxidation at specific sites in RNase during glycoxidation or lipoxidation by glucose or arachidonate, respectively. Glycoxidized and lipoxidized RNase were analyzed by tryptic digestion, followed by reversed phase HPLC and mass spectrometric analysis to quantify methionine and methionine sulfoxide containing peptides. We observed that: (1) compared to AGE/ALEs, methionine sulfoxide was a more sensitive biomarker of glycoxidative or lipoxidative damage to proteins; (2) regardless of oxidizable substrate, the relative rate of oxidation of methionine residues in RNase was Met29>Met30>Met13, with Met79 being resistant to oxidation; and (3) arachidonate produced a significantly greater yield of MetSO, compared to glucose. The methods developed here should be useful for assessing a protein's overall exposure to oxidative stress from a variety of sources in vivo.

Indexed as

Amino Acid SequenceArachidonic AcidChromatography, LiquidGlucoseMethionineMolecular Sequence DataOxidation-ReductionPeptidesRibonuclease, PancreaticSpectrometry, Mass, Electrospray IonizationArachidonic AcidGlucoseMethioninemethionine sulfoxidePeptidesRibonuclease, Pancreatic

Identifiers

PMID17141728
PMCPMC1828205
OpenAlexW2039231123

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.