Evidence map›Paper›PMID 17137590›Full record

ArticleJournal of molecular biology2007

A novel disulfide bond in the SH2 Domain of the C-terminal Src kinase controls catalytic activity.

Jamie E Mills, Paul C Whitford, Jennifer Shaffer, Jose N Onuchic, Joseph A Adams, Patricia A Jennings

Abstract read
In one paragraph

Article in Journal of molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. CSK-mediated signalling by integrins in cancer.Frontiers in cell and developmental biology · 2023
    Review
  3. Review
  4. The reduced form of the antibody CH2 domain.Protein science : a publication of the Protein Society · 2021
    Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Regulation of the SRC family kinases by Csk.International journal of biological sciences · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jamie E MillsDepartment of Chemistry & Biochemistry, University of California-San Diego, La Jolla, CA 92093, USA.
Paul C Whitford
Jennifer Shaffer
Jose N Onuchic
Joseph A Adams
Patricia A Jennings

Funding

Project# 4: INTERACTIONS OF ANCHORING PROTEINS WITH THEIR TARGETSP01DK054441 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TAYLOR, SUSAN S. · 1999 to 2017
$27.3M
MOLECULAR BIOPHYSICS TRAINING PROGRAMT32GM008326 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 1989 to 2020
$7.5M
Role of protein phosphorylation in RNA splicingR01GM067969 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADAMS, JOSEPH · 2004 to 2024
$6.4M
Regulation of Nonreceptor Tyrosine Kinases through Csk.R01GM068168 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADAMS, JOSEPH A · 2003 to 2006
$1.0M
NIDDK NIH HHS DK 54441NIDDK NIH HHS P01 DK054441NIGMS NIH HHS GM 68168NIGMS NIH HHS R01 GM067969NIGMS NIH HHS R01 GM068168NIGMS NIH HHS T32 GM 08326
6 · The paper itself

Abstract

The SH2 domain of the C-terminal Src kinase [Csk] contains a unique disulfide bond that is not present in other known SH2 domains. To investigate whether this unusual disulfide bond serves a novel function, the effects of disulfide bond formation on catalytic activity of the full-length protein and on the structure of the SH2 domain were investigated. The kinase activity of full-length Csk decreases by an order of magnitude upon formation of the disulfide bond in the distal SH2 domain. NMR spectra of the fully oxidized and fully reduced SH2 domains exhibit similar chemical shift patterns and are indicative of similar, well-defined tertiary structures. The solvent-accessible disulfide bond in the isolated SH2 domain is highly stable and far from the small lobe of the kinase domain. However, reduction of this bond results in chemical shift changes of resonances that map to a cluster of residues that extend from the disulfide bond across the molecule to a surface that is in direct contact with the small lobe of the kinase domain in the intact molecule. Normal mode analyses and molecular dynamics calculations suggest that disulfide bond formation has large effects on residues within the kinase domain, most notably within the active-site cleft. Overall, the data indicate that reversible cross-linking of two cysteine residues in the SH2 domain greatly impacts catalytic function and interdomain communication in Csk.

Indexed as

src Homology DomainsBinding SitesCatalysisCSK Tyrosine-Protein KinaseCysteineDisulfidesHumansModels, MolecularOxidation-ReductionProtein Structure, SecondaryProtein-Tyrosine Kinasessrc-Family KinasesStructure-Activity RelationshipSurface PropertiesCSK protein, humanCSK Tyrosine-Protein KinaseCysteineDisulfidesProtein-Tyrosine Kinasessrc-Family Kinases

Identifiers

PMID17137590
PMCPMC2741090

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.