ArticleJournal of virology2007
Evidence for the existence of the loop E motif of Potato spindle tuber viroid in vivo.
Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
What it found
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Who cites it
15 citing papers in PubMed.
- A nuclear import pathway exploited by pathogenic noncoding RNAs.The Plant cell · 2022Article
- Conserved Motifs and Domains in Members ofCells · 2022Article
- Progress in 50 years of viroid research-Molecular structure, pathogenicity, and host adaptation.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2021Article
- Functional analysis reveals G/U pairs critical for replication and trafficking of an infectious non-coding viroid RNA.Nucleic acids research · 2020Article
- Article
- Modelling the three-dimensional structure of the right-terminal domain of pospiviroids.Scientific reports · 2017Article
- Viroids: from genotype to phenotype just relying on RNA sequence and structural motifs.Frontiers in microbiology · 2012Article
- Function and evolution of a MicroRNA that regulates a Ca2+-ATPase and triggers the formation of phased small interfering RNAs in tomato reproductive growth.The Plant cell · 2011Article
- Article
- A genomic map of viroid RNA motifs critical for replication and systemic trafficking.The Plant cell · 2008Article
- Processing of nuclear viroids in vivo: an interplay between RNA conformations.PLoS pathogens · 2007Article
- Tertiary structure and function of an RNA motif required for plant vascular entry to initiate systemic trafficking.The EMBO journal · 2007Article
- Structural differences within the loop E motif imply alternative mechanisms of viroid processing.RNA (New York, N.Y.) · 2007Article
- A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNA-induced silencing complex-mediated degradation.Journal of virology · 2007Article
- Article
Corrections and comments
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Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
RNA motifs comprising nucleotides that interact through non-Watson-Crick base pairing play critical roles in RNA functions, often by serving as the sites for RNA-RNA, RNA-protein, or RNA small ligand interactions. The structures of viral and viroid RNA motifs are studied commonly by in vitro, computational, and mutagenesis approaches. Demonstration of the in vivo existence of a motif will help establish its biological significance and promote mechanistic studies on its functions. By using UV cross-linking and primer extension, we have obtained direct evidence for the in vivo existence of the loop E motif of Potato spindle tuber viroid. We present our findings and discuss their biological implications.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.