Evidence map›Paper›PMID 17116752›Full record

ArticleThe Journal of cell biology2006

The major human and mouse granzymes are structurally and functionally divergent.

Dion Kaiserman, Catherina H Bird, Jiuru Sun, Antony Matthews, Kheng Ung, James C Whisstock, Philip E Thompson, Joseph A Trapani, Phillip I Bird

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 195 citations in OpenAlex.

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  18. Cytolytic CD4Frontiers in immunology · 2022
    Review
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28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Dion KaisermanDepartment of Biochemistry and Molecular Biology and 2Victorian Bioinformatics Consortium, Monash University, Victoria 3800, Australia.
Catherina H Bird
Jiuru Sun
Antony Matthews
Kheng Ung
James C Whisstock
Philip E Thompson
Joseph A Trapani
Phillip I Bird
Melbourne Bioinformatics · AUMonash University · AUPeter MacCallum Cancer Centre · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Approximately 2% of mammalian genes encode proteases. Comparative genomics reveals that those involved in immunity and reproduction show the most interspecies diversity and evidence of positive selection during evolution. This is particularly true of granzymes, the cytotoxic proteases of natural killer cells and CD8+ T cells. There are 5 granzyme genes in humans and 10 in mice, and it is suggested that granzymes evolve to meet species-specific immune challenge through gene duplication and more subtle alterations to substrate specificity. We show that mouse and human granzyme B have distinct structural and functional characteristics. Specifically, mouse granzyme B is 30 times less cytotoxic than human granzyme B and does not require Bid for killing but regains cytotoxicity on engineering of its active site cleft. We also show that mouse granzyme A is considerably more cytotoxic than human granzyme A. These results demonstrate that even "orthologous" granzymes have species-specific functions, having evolved in distinct environments that pose different challenges.

Indexed as

Genetic VariationAmino Acid SequenceAnimalsBH3 Interacting Domain Death Agonist ProteinCell DeathConserved SequenceCytotoxicity, ImmunologicGlycineGranzymesHumansJurkat CellsMembrane GlycoproteinsMiceMolecular Sequence DataPeptide LibraryPeptidesBH3 Interacting Domain Death Agonist ProteinGlycineGranzymesGZMA protein, humanGZMB protein, humanGzmb protein, mouseMembrane GlycoproteinsPeptide LibraryPeptidesPerforinPore Forming Cytotoxic ProteinsSerpins

Identifiers

PMID17116752
PMCPMC2064598
OpenAlexW2023075010

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.