Evidence map›Paper›PMID 17113727›Full record

ArticleGene2007

Multiple roles for MSH2 in the repair of a deletion mutation directed by modified single-stranded oligonucleotides.

Katie Kennedy Maguire, Eric B Kmiec

Open access · greenAbstract read
In one paragraph

Article in Gene, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
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  4. Review
  5. Review
  6. Parameters of oligonucleotide-mediated gene modification in mouse ES cells.Journal of cellular and molecular medicine · 2010
    Article
  7. Article
  8. Article
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  12. Review
  13. Oligonucleotide transformation of yeast reveals mismatch repair complexes to be differentially active on DNA replication strands.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Katie Kennedy MaguireDepartment of Biological Sciences, University of Delaware, Delaware Biotechnology Institute, 15 Innovation Way, Newark, DE 19711, USA.
Eric B Kmiec
Biotechnology Institute · USUniversity of Delaware · US

Funding

Regulation of Targeted Gene CorrectionR01CA089325 · NCI · UNIVERSITY OF DELAWARE · PI KMIEC, ERIC B. · 2001 to 2012
$2.6M
NCI NIH HHS R01 CA089325
6 · The paper itself

Abstract

The mechanism by which modified single-stranded oligonucleotides (MSSOs) direct base changes in genes is not completely understood, but there is evidence that DNA damage, repair and cell cycle checkpoint proteins are involved in the targeted nucleotide exchange (TNE) process. We are interested in the role of the mismatch repair protein, Msh2 in the correction of a frameshift mutation in both yeast and mammalian cells. We show that this protein exerts different and opposing influences on the TNE reaction in MSH2 deficient yeast compared to MSH2(-/-) mammalian cells and in wild-type cells that have RNAi silenced Msh2. Data from yeast show a 10-fold decrease in the targeting frequency whereas mammalian cells have an elevated correction frequency. These results show that in yeast this protein is required for efficient targeting and may play a role in mismatch recognition and repair. In mammalian cells, Msh2 plays a suppressive role in TNE reaction by either precluding the oligonucleotide annealing to the target gene or by maintenance of a cell cycle checkpoint induced by the MSSO itself. These results reveal that the mechanism of TNE between yeast and mammalian cells is not conserved, and demonstrate that the suppression of the TNE reaction can be bypassed using RNAi against MSH2 designed to knockdown its expression.

Indexed as

Base Pair MismatchDNA RepairMutagenesis, Site-DirectedAnimalsBase SequenceCell LineFrameshift MutationFungal ProteinsGene TargetingMiceMolecular Sequence DataMutS Homolog 2 ProteinRNA InterferenceSaccharomyces cerevisiaeSequence DeletionFungal ProteinsMutS Homolog 2 Protein

Identifiers

PMID17113727
PMCPMC1847641
OpenAlexW2121142452

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.