Evidence map›Paper›PMID 17112617›Full record

ArticleVirus research2007

Molecular dissection of nuclear entry-competent SV40 during infection.

Akira Nakanishi, Peggy P Li, Qiumin Qu, Qumber H Jafri, Harumi Kasamatsu

Open access · greenAbstract read
In one paragraph

Article in Virus research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 33 citations in OpenAlex.

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  18. BK polyomavirus: emerging pathogen.Microbes and infection · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Akira NakanishiDepartment of Molecular, Cell, and Developmental Biology and Molecular Biology Institute, University of California, Los Angeles, CA 90095, USA.
Peggy P Li
Qiumin Qu
Qumber H Jafri
Harumi Kasamatsu
University of California, Los Angeles · US

Funding

ASSEMBLY AND MORPHOGENESIS OF DNA TUMOR VIRUSESR01CA050574 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KASAMATSU, HARUMI · 1990 to 2006
$1.9M
NCI NIH HHS CA50574NCI NIH HHS R01 CA050574NCI NIH HHS R01 CA050574-14
6 · The paper itself

Abstract

To establish viral infection, SV40 must expose nuclear localization signals (NLSs) that are internal in the virion architecture in order to enter the nucleus via interaction with the host's nuclear import machinery, which includes importin alpha and importin beta. The time course for SV40 association with the importins in infected cells was examined. The viral DNA associated with importin alpha by 1.5h post infection, before associating with the importin beta nuclear import receptor, by 3h post infection. Only a small fraction of cell-internalized SV40 that contained viral DNA was bound by the two importins. This fraction, termed "nuclear entry-competent SV40," was slightly smaller than the virion but, importantly, was larger than the viral chromatin and contained both Vp1 and Vp3. Furthermore, the internalized viral DNA in either anti-importin or anti-Vp3 immune complexes was sensitive to DNase I, whereas the viral DNA in mature virions was resistant. All these results suggest that once SV40 enters the cytoplasm, it undergoes an architectural modification that exposes the virion's NLSs for nuclear entry.

Indexed as

alpha KaryopherinsAnimalsbeta KaryopherinsCapsid ProteinsCell LineDeoxyribonuclease IDNA, ViralHaplorhiniKineticsMacromolecular SubstancesProtein BindingSimian virus 40Viral Proteinsalpha Karyopherinsbeta KaryopherinsCapsid ProteinsDeoxyribonuclease IDNA, ViralMacromolecular SubstancesViral ProteinsVP1 protein, polyomavirusVP3 protein, Simian virus 40

Identifiers

PMID17112617
PMCPMC1847345
OpenAlexW1976254995

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.