Evidence map›Paper›PMID 17110164›Full record

ArticleBiochimica et biophysica acta2007

Mutagenesis of rat acyl-CoA synthetase 4 indicates amino acids that contribute to fatty acid binding.

Lori Stinnett, Tal M Lewin, Rosalind A Coleman

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Acyl-CoA metabolism and partitioning.Annual review of nutrition · 2014
    Review
  6. Article
  7. Article
  8. Acyl-CoA synthesis, lipid metabolism and lipotoxicity.Biochimica et biophysica acta · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Lori StinnettDepartment of Nutrition, 2301 Michael Hooker Research Center, Pittsboro St., University of North Carolina, Chapel Hill, NC 27599, USA.
Tal M Lewin
Rosalind A Coleman
University of North Carolina at Chapel Hill · US

Funding

Acyl-CoA Synthetase: Structure, Function and RegulationR01DK059935 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COLEMAN, ROSALIND ANNE · 2002 to 2015
$4.7M
Obesity and Diabetes induced cardiomyopathyK01DK059931 · NIDDK · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI LEWIN, TAL M · 2002 to 2004
$299k
NIDDK NIH HHS DK059931NIDDK NIH HHS DK59935NIDDK NIH HHS K01 DK059931NIDDK NIH HHS R01 DK059935
6 · The paper itself

Abstract

Although each of the five mammalian long-chain acyl-CoA synthetases (ACSL) can bind saturated and unsaturated fatty acids ranging from 12 to 22 carbons, ACSL4 prefers longer chain polyunsaturated fatty acids. In order to gain a better understanding of ACSL4 fatty acid binding, we based a mutagenesis approach on sequence alignments related to ttLC-FACS crystallized from Thermus thermophilus HB8. Four residues selected for mutagenesis corresponded to residues in ttLC-FACS that comprise the fatty acid binding pocket; the fifth residue aligned with a region thought to be involved in fatty acid selectivity of the Escherichia coli acyl-CoA synthetase, FadD. Changing an amino acid at the entry of the putative fatty acid binding pocket, G401L, resulted in an inactive enzyme. Mutating a residue near the pocket entry, L399M, did not significantly alter enzyme activity, but mutating a residue at the hydrophobic terminus of the pocket, S291Y, altered ACSL4's preference for 20:5 and 22:6 and increased its apparent K(m) for ATP. Mutating a site in a region previously identified as important for fatty acid binding also altered activation of 20:4 and 20:5. These studies suggested that the preference of ACSL4 for long-chain polyunsaturated fatty acids can be modified by altering specific amino acid residues.

Indexed as

Amino Acid SubstitutionMutation, MissenseAmino Acid SequenceAnimalsBinding SitesCoenzyme A LigasesEnzyme ActivationEscherichia coliFatty Acids, UnsaturatedMolecular Sequence DataMutagenesis, Site-DirectedProtein BindingRatsSequence AlignmentThermus thermophilusAcsl4 protein, ratCoenzyme A LigasesFatty Acids, Unsaturated

Identifiers

PMID17110164
PMCPMC1828365
OpenAlexW2049318107

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.