Evidence map›Paper›PMID 17103052›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2006

A locus on mouse Chromosome 9 (Adip5) affects the relative weight of the gonadal but not retroperitoneal adipose depot.

Amanda H McDaniel, Xia Li, Michael G Tordoff, Alexander A Bachmanov, Danielle R Reed

Abstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Burly1 is a mouse QTL for lean body mass that maps to a 0.8-Mb region of chromosome 2.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  7. Article
  8. Article
  9. Article
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  11. Article
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  14. Congenic and bioinformatics analyses resolved a major-effect Fob3b QTL on mouse Chr 15 into two closely linked loci.Mammalian genome : official journal of the International Mammalian Genome Society · 2010
    Article
  15. Genotype X diet interactions in mice predisposed to mammary cancer. I. Body weight and fat.Mammalian genome : official journal of the International Mammalian Genome Society · 2008
    Article
  16. Genetic loci affecting body weight and fatness in a C57BL/6J x PWK/PhJ mouse intercross.Mammalian genome : official journal of the International Mammalian Genome Society · 2007
    Article
  17. Quantitative trait loci for individual adipose depot weights in C57BL/6ByJ x 129P3/J F2 mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Amanda H McDanielMonell Chemical Senses Center, 3500 Market Street, Philadelphia, Pennsylvania 19104, USA.
Xia Li
Michael G Tordoff
Alexander A Bachmanov
Danielle R Reed

Funding

PHYSIOLOGY OF CALCIUM APPETITER01DK046791 · NIDDK · MONELL CHEMICAL SENSES CENTER · PI TORDOFF, MICHAEL G · 1994 to 2013
$5.5M
MODIFICATION OF SALT TASTER01DC000882 · NIDCD · MONELL CHEMICAL SENSES CENTER · PI BACHMANOV, ALEXANDER A · 1990 to 2013
$4.7M
MAPPING GENES FOR BODY WEIGHT AND FATNESS IN MICER01DK058797 · NIDDK · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2000 to 2013
$3.4M
GENETICS OF ALCOHOL RELATED INGESTIVE BEHAVIORS IN MICER01AA011028 · NIAAA · MONELL CHEMICAL SENSES CENTER · PI BACHMANOV, ALEXANDER A · 1997 to 2007
$1.5M
EFFICIENT METHODS TO DETECT TASTE ABNORMALITIES IN MICER01AA012715 · NIAAA · MONELL CHEMICAL SENSES CENTER · PI TORDOFF, MICHAEL G · 2000 to 2009
$1.4M
Fine mapping of mouse chr 2 for body composition genesR01DK094759 · NIDDK · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2011 to 2014
$1.2M
NIAAA NIH HHS R01 AA011028NIAAA NIH HHS R01AA011028NIAAA NIH HHS R01 AA012715NIAAA NIH HHS R01AA12715NIDCD NIH HHS R01 DC000882NIDCD NIH HHS R01DC00882NIDDK NIH HHS R01 DK046791NIDDK NIH HHS R01DK046791NIDDK NIH HHS R01 DK058797NIDDK NIH HHS R01DK058797NIDDK NIH HHS R01 DK094759
6 · The paper itself

Abstract

To identify the gene or genes on mouse Chromosome 9 that contribute to strain differences in fatness, we conducted an expanded mapping analysis to better define the region where suggestive linkage was found, using the F(2 )generation of an intercross between the C57BL/6ByJ and 129P3/J mouse strains. Six traits were studied: the summed weight of two adipose depots, the weight of each depot, analyzed individually (the gonadal and retroperitoneal depot), and the weight of each depot (summed and individual) relative to body size. We found significant linkage (LOD = 4.6) that accounted for the relative weight of the summed adipose depots, and another for the relative weight of the gonadal (LOD = 5.3) but not retroperitoneal (LOD = 0.9) adipose depot. This linkage is near marker rs30280752 (61.1 Mb, Build 34) and probably is equivalent to the quantitative trait locus (QTL) Adip5. Because the causal gene is unknown, we identified and evaluated several candidates within the confidence interval with functional significance to the body fatness phenotype (Il18, Acat1, Cyp19a1, Crabp1, Man2c1, Neil1, Mpi1, Csk, Lsm16, Adpgk, Bbs4, Hexa, Thsd4, Dpp8, Anxa2, and Lipc). We conclude that the Adip5 locus is specific to the gonadal adipose depot and that a gene or genes near the linkage peak may account for this QTL.

Indexed as

Chromosomes, MammalianAdipose TissueAnimalsBody ConstitutionChromosome MappingFemaleGonadsIntra-Abdominal FatLod ScoreMaleMiceMolecular Sequence DataObesityOrgan SizeQuantitative Trait Loci

Identifiers

PMID17103052
PMCPMC1698868

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.