Evidence map›Paper›PMID 17101985›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Evolution and expression of chimeric POTE-actin genes in the human genome.

Yoomi Lee, Tomoko Ise, Duc Ha, Ashley Saint Fleur, Yoonsoo Hahn, Xiu-Fen Liu, Satoshi Nagata, Byungkook Lee, Tapan K Bera, Ira Pastan

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
5.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Yoomi LeeLaboratory of Molecular Biology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892-4264, USA.
Tomoko Ise
Duc Ha
Ashley Saint Fleur
Yoonsoo Hahn
Xiu-Fen Liu
Satoshi Nagata
Byungkook Lee
Tapan K Bera
Ira Pastan
National Institutes of Health · USCenter for Cancer Research · USNational Cancer Institute · US

Funding

Intramural NIH HHS
6 · The paper itself

Abstract

We previously described a primate-specific gene family, POTE, that is expressed in many cancers but in a limited number of normal organs. The 13 POTE genes are dispersed among eight different chromosomes and evolved by duplications and remodeling of the human genome from an ancestral gene, ANKRD26. Based on sequence similarity, the POTE gene family members can be divided into three groups. By genome database searches, we identified an actin retroposon insertion at the carboxyl terminus of one of the ancestral POTE paralogs. By Northern blot analysis, we identified the expected 7.5-kb POTE-actin chimeric transcript in a breast cancer cell line. The protein encoded by the POTE-actin transcript is predicted to be 120 kDa in size. Using anti-POTE mAbs that recognize the amino-terminal portion of the POTE protein, we detected the 120-kDa POTE-actin fusion protein in breast cancer cell lines known to express the fusion transcript. These data demonstrate that insertion of a retroposon produced an altered functional POTE gene. This example indicates that new functional human genes can evolve by insertion of retroposons.

Indexed as

Evolution, MolecularGenome, HumanMultigene FamilyActinsAnimalsBase SequenceBreast NeoplasmsCell Line, TumorFemaleHaplorhiniHumansMolecular Sequence DataMutagenesis, InsertionalPhylogenyProteinsRecombinant Fusion ProteinsActinsProteinsRecombinant Fusion ProteinsRetroelements

Identifiers

PMID17101985
PMCPMC1693842
OpenAlexW1993167185

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.