Evidence map›Paper›PMID 17101802›Full record

ArticleMolecular and cellular biology2007

Distinct promoters mediate the regulation of Ebf1 gene expression by interleukin-7 and Pax5.

Stephanie Roessler, Ildiko Györy, Sascha Imhof, Mikhail Spivakov, Ruth R Williams, Meinrad Busslinger, Amanda G Fisher, Rudolf Grosschedl

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 168 citations in OpenAlex.

  1. Trial
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  9. EBF1 is continuously required for stabilizing local chromatin accessibility in pro-B cells.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Article
  11. Frontiers in oncology · 2022
    Review
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  18. Review
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25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Stephanie RoesslerMax Planck Institute of Immunobiology, Department of Cellular and Molecular Immunology, 79108 Freiburg, Germany.
Ildiko Györy
Sascha Imhof
Mikhail Spivakov
Ruth R Williams
Meinrad Busslinger
Amanda G Fisher
Rudolf Grosschedl
Max Planck Institute of Immunobiology and Epigenetics · DEHammersmith Hospital · GBResearch Institute of Molecular Pathology · AT

Funding

Medical Research Council MC_U120027516
6 · The paper itself

Abstract

Early differentiation of B lymphocytes requires the function of multiple transcription factors that regulate the specification and commitment of the lineage. Loss- and gain-of-function experiments have provided important insight into the transcriptional control of B lymphopoiesis, whereby E2A was suggested to act upstream of EBF1 and Pax5 downstream of EBF1. However, this simple hierarchy cannot account for all observations, and our understanding of a presumed regulatory network, in which transcription factors and signaling pathways operate, is limited. Here, we show that the expression of the Ebf1 gene involves two promoters that are differentially regulated and generate distinct protein isoforms. We find that interleukin-7 signaling, E2A, and EBF1 activate the distal Ebf1 promoter, whereas Pax5, together with Ets1 and Pu.1, regulates the stronger proximal promoter. In the absence of Pax5, the function of the proximal Ebf1 promoter and accumulation of EBF1 protein are impaired and the replication timing and subcellular localization of the Ebf1 locus are altered. Taken together, these data suggest that the regulation of Ebf1 via distinct promoters allows for the generation of several feedback loops and the coordination of multiple determinants of B lymphopoiesis in a regulatory network.

Indexed as

Promoter Regions, GeneticAnimalsBase SequenceCell LineDNA-Binding ProteinsDNA ReplicationGene Expression RegulationGenes, ReporterHumansInterleukin-7MiceMice, Inbred C57BLMolecular Sequence DataPAX5 Transcription FactorProto-Oncogene ProteinsProto-Oncogene Protein Spi-1DNA-Binding ProteinsEBF1 protein, humanEbf1 protein, mouseInterleukin-7Pax5 protein, mousePAX5 Transcription FactorProto-Oncogene ProteinsProto-Oncogene Protein Spi-1STAT5 Transcription FactorTCF7L1 protein, humanTcf7l1 protein, mouseTCF Transcription FactorsTrans-ActivatorsTranscription Factor 7-Like 1 Protein

Identifiers

PMID17101802
PMCPMC1800812
OpenAlexW2125310129

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.