Evidence map›Paper›PMID 17099234›Full record

ArticleNucleic acids research2007

WormBase: new content and better access.

Tamberlyn Bieri, Darin Blasiar, Philip Ozersky, Igor Antoshechkin, Carol Bastiani, Payan Canaran, Juancarlos Chan, Nansheng Chen, Wen J Chen, Paul Davis and 24 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Article
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  9. Using C. elegans for antimicrobial drug discovery.Expert opinion on drug discovery · 2011
    Article
  10. Article
  11. Neisseria Base: a comparative genomics database for Neisseria meningitidis.Database : the journal of biological databases and curation · 2011
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

Tamberlyn BieriGenome Sequencing Center, Washington University School of Medicine, St Louis, MO 63108, USA. tbieri@watson.wustl.edu
Darin Blasiar
Philip Ozersky
Igor Antoshechkin
Carol Bastiani
Payan Canaran
Juancarlos Chan
Nansheng Chen
Wen J Chen
Paul Davis
Tristan J Fiedler
Lisa Girard
Michael Han
Todd W Harris
Ranjana Kishore
Raymond Lee
Sheldon McKay
Hans-Michael Müller
Cecilia Nakamura
Andrei Petcherski
Arun Rangarajan
Anthony Rogers
Gary Schindelman
Erich M Schwarz
Will Spooner
Mary Ann Tuli
Kimberly Van Auken
Daniel Wang
Xiaodong Wang
Gary Williams
Richard Durbin
Lincoln D Stein
Paul W Sternberg
John Spieth

Funding

Wormbase SupplementP41HG002223 · NHGRI · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STERNBERG, PAUL WARREN · 2000 to 2012
$32.0M
Medical Research Council G0701197NHGRI NIH HHS P41 HG002223NHGRI NIH HHS P41-HG02223
6 · The paper itself

Abstract

WormBase (http://wormbase.org), a model organism database for Caenorhabditis elegans and other related nematodes, continues to evolve and expand. Over the past year WormBase has added new data on C.elegans, including data on classical genetics, cell biology and functional genomics; expanded the annotation of closely related nematodes with a new genome browser for Caenorhabditis remanei; and deployed new hardware for stronger performance. Several existing datasets including phenotype descriptions and RNAi experiments have seen a large increase in new content. New datasets such as the C.remanei draft assembly and annotations, the Vancouver Fosmid library and TEC-RED 5' end sites are now available as well. Access to and searching WormBase has become more dependable and flexible via multiple mirror sites and indexing through Google.

Indexed as

Databases, GeneticAnimalsCaenorhabditisCaenorhabditis elegansGenes, HelminthGenome, HelminthGenomicsInternetOligonucleotide Array Sequence AnalysisPhenotypeRNA InterferenceUser-Computer Interface

Identifiers

PMID17099234
PMCPMC1669750

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.