ArticlePlant physiology2007
MAIZEWALL. Database and developmental gene expression profiling of cell wall biosynthesis and assembly in maize.
Article in Plant physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
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Who cites it
36 citing papers in PubMed.
- Breeding for improved digestibility and processing of lignocellulosic biomass inFrontiers in plant science · 2024Review
- Single-cell RNA sequencing profiles reveal cell type-specific transcriptional regulation networks conditioning fungal invasion in maize roots.Plant biotechnology journal · 2023Article
- R3-MYB repressor Mybr97 is a candidate gene associated with the Anthocyanin3 locus and enhanced anthocyanin accumulation in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Tartary buckwheat database (TBD): an integrative platform for gene analysis of and biological information on Tartary buckwheat.Journal of Zhejiang University. Science. B · 2021Article
- Genome-wide analysis of general phenylpropanoid and monolignol-specific metabolism genes in sugarcane.Functional & integrative genomics · 2021Article
- Identification of genes from the general phenylpropanoid and monolignol-specific metabolism in two sugarcane lignin-contrasting genotypes.Molecular genetics and genomics : MGG · 2020Article
- Genetic, transcriptional, and regulatory landscape of monolignol biosynthesis pathway inBiotechnology for biofuels · 2020Article
- Potentials, Challenges, and Genetic and Genomic Resources for Sugarcane Biomass Improvement.Frontiers in plant science · 2018Review
- Regulation of CONIFERALDEHYDE 5-HYDROXYLASE expression to modulate cell wall lignin structure in rice.Planta · 2017Article
- Silencing CHALCONE SYNTHASE in Maize Impedes the Incorporation of Tricin into Lignin and Increases Lignin Content.Plant physiology · 2017Article
- Article
- Proteomic analysis of maize grain development using iTRAQ reveals temporal programs of diverse metabolic processes.BMC plant biology · 2016Article
- Co-expression network analysis reveals transcription factors associated to cell wall biosynthesis in sugarcane.Plant molecular biology · 2016Article
- Developing Pericarp of Maize: A Model to Study Arabinoxylan Synthesis and Feruloylation.Frontiers in plant science · 2016Article
- Molecular cloning and functional analysis of nine cinnamyl alcohol dehydrogenase family members in Populus tomentosa.Planta · 2014Article
- Lignification in sugarcane: biochemical characterization, gene discovery, and expression analysis in two genotypes contrasting for lignin content.Plant physiology · 2013Article
- Genetic and physical fine mapping of the novel brown midrib gene bm6 in maize (Zea mays L.) to a 180 kb region on chromosome 2.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012Article
- Diversity and linkage disequilibrium features in a composite public/private dent maize panel: consequences for association genetics as evaluated from a case study using flowering time.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012Article
- Article
- Characterization of a cinnamoyl-CoA reductase 1 (CCR1) mutant in maize: effects on lignification, fibre development, and global gene expression.Journal of experimental botany · 2011Article
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9 authors.
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Abstract
An extensive search for maize (Zea mays) genes involved in cell wall biosynthesis and assembly has been performed and 735 sequences have been centralized in a database, MAIZEWALL (http://www.polebio.scsv.ups-tlse.fr/MAIZEWALL). MAIZEWALL contains a bioinformatic analysis for each entry and gene expression data that are accessible via a user-friendly interface. A maize cell wall macroarray composed of a gene-specific tag for each entry was also constructed to monitor global cell wall-related gene expression in different organs and during internode development. By using this macroarray, we identified sets of genes that exhibit organ and internode-stage preferential expression profiles. These data provide a comprehensive fingerprint of cell wall-related gene expression throughout the maize plant. Moreover, an in-depth examination of genes involved in lignin biosynthesis coupled to biochemical and cytological data from different organs and stages of internode development has also been undertaken. These results allow us to trace spatially and developmentally regulated, putative preferential routes of monolignol biosynthesis involving specific gene family members and suggest that, although all of the gene families of the currently accepted monolignol biosynthetic pathway are conserved in maize, there are subtle differences in family size and a high degree of complexity in spatial expression patterns. These differences are in keeping with the diversity of lignified cell types throughout the maize plant.
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