Evidence map›Paper›PMID 17097160›Full record

ArticleMolecular and biochemical parasitology2007

Characterization of protein kinase CK2 from Trypanosoma brucei.

Bryan C Jensen, Charles T Kifer, Deirdre L Brekken, Amber C Randall, Qin Wang, Becky L Drees, Marilyn Parsons

Open access · greenAbstract read
In one paragraph

Article in Molecular and biochemical parasitology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 62 citations in OpenAlex.

  1. An essentialFrontiers in parasitology · 2023
    Article
  2. Biochemistry · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Bryan C JensenSeattle Biomedical Research Institute, 307 Westlake Avenue North, Suite 500, Seattle, WA 98108-5219, USA.
Charles T Kifer
Deirdre L Brekken
Amber C Randall
Qin Wang
Becky L Drees
Marilyn Parsons
Center for Infectious Disease Research · USHoward Hughes Medical Institute · US

Funding

TYROSINE KINASE OF TRYPANOSOMA BRUCEIR01AI031077 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI PARSONS, MARILYN · 1992 to 2010
$3.6M
T BRUCEI NUCLEOLAR PROTEIN: MECHANISM OF LOCALIZATIONF32AI010637 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI BREKKEN, DEIRDRE V · 2000 to 2002
$65k
NIAID NIH HHS F32 AI010637NIAID NIH HHS F32 AI10637NIAID NIH HHS R01 AI031077NIAID NIH HHS R01 AI31077
6 · The paper itself

Abstract

CK2 is a ubiquitous but enigmatic kinase. The difficulty in assigning a role to CK2 centers on the fact that, to date, no biologically relevant modulator of its function has been identified. One common theme revolves around a constellation of known substrates involved in growth control, compatible with its concentration in the nucleus and nucleolus. We had previously described the identification of two catalytic subunits of CK2 in Trypanosoma brucei and characterized one of them. Here we report the characterization of the second catalytic subunit, CK2alpha', and the identification and characterization of the regulatory subunit CK2beta. All three subunits are primarily localized to the nucleolus in T. brucei. We also show that CK2beta interacts with the nucleolar protein NOG1, adding to the interaction map which previously linked CK2alpha to the nucleolar protein NOPP44/46, which in turn associates with the rRNA binding protein p37. CK2 activity has four distinctive features: near equal affinity for GTP and ATP, heparin sensitivity, and stimulation by polyamines and polybasic peptides. Sequence comparison shows that the parasite orthologues have mutations in residues previously mapped as important in specifying affinity for GTP and stimulation by both polyamines and polybasic peptides. Studies of the enzymatic activity of the T. brucei CK2s show that both the affinity for GTP and stimulation by polyamines have been lost and only the features of heparin inhibition and stimulation by polybasic peptides are conserved.

Indexed as

Amino Acid SequenceAnimalsCasein Kinase IICell NucleusConserved SequenceGene Expression Regulation, DevelopmentalHumansIsoenzymesMolecular Sequence DataProtein BindingRNA InterferenceSequence AlignmentTrypanosoma brucei bruceiCasein Kinase IIIsoenzymes

Identifiers

PMID17097160
PMCPMC1790856
OpenAlexW2023037868

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.