Evidence map›Paper›PMID 17095607›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Pmr1, a Golgi Ca2+/Mn2+-ATPase, is a regulator of the target of rapamycin (TOR) signaling pathway in yeast.

Gina Devasahayam, Danilo Ritz, Stephen B Helliwell, Daniel J Burke, Thomas W Sturgill

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Possible Role of the CaMolecules (Basel, Switzerland) · 2019
    Article
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  6. Article
  7. Article
  8. Review
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  11. Impaired manganese metabolism causes mitotic misregulation.The Journal of biological chemistry · 2012
    Article
  12. Review
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  14. Review
  15. Review
  16. Article
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  18. Nuclear translocation of Gln3 in response to nutrient signals requires Golgi-to-endosome trafficking in Saccharomyces cerevisiae.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Gina DevasahayamDepartments of Pharmacology, University of Virginia Health Sciences Center, Charlottesville, VA 22908, USA.
Danilo Ritz
Stephen B Helliwell
Daniel J Burke
Thomas W Sturgill
University of Basel · CHUniversity of Virginia · USUniversity of Pennsylvania · US

Funding

GENETIC CONTROL OF MITOTIC SPINDLE ASSEMBLY AND FUNCTIONR01GM040334 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI BURKE, DANIEL J · 1993 to 2005
$1.4M
Regulation and Function of MAPKAP KinasesR01GM062890 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI STURGILL, THOMAS W · 2002 to 2005
$1.2M
GENETIC ANALYSIS OF REGULATED TUBULIN SYNTHESISR29GM040334 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI BURKE, DANIEL J · 1988 to 1993
–
NIGMS NIH HHS GM40334NIGMS NIH HHS GM62890NIGMS NIH HHS R01 GM040334NIGMS NIH HHS R01 GM062890
6 · The paper itself

Abstract

The rapamycin.FKBP12 complex inhibits target of rapamycin (TOR) kinase in TORC1. We screened the yeast nonessential gene deletion collection to identify mutants that conferred rapamycin resistance, and we identified PMR1, encoding the Golgi Ca2+/Mn2+ -ATPase. Deleting PMR1 in two genetic backgrounds confers rapamycin resistance. Epistasis analyses show that Pmr1 functions upstream from Npr1 and Gln-3 in opposition to Lst8, a regulator of TOR. Npr1 kinase is largely cytoplasmic, and a portion localizes to the Golgi where amino acid permeases are modified and sorted. Nuclear translocation of Gln-3 and Gln-3 reporter activity in pmr1 cells are impaired, but expression of functional Gap1 in the plasma membrane of a pmr1 strain in response to nitrogen limitation is enhanced. These two phenotypes suggest up-regulation of Npr1 function in the absence of Pmr1. Together, our results establish that Pmr1-dependent Ca2+ and/or Mn2+ ion homeostasis is necessary for TOR signaling.

Indexed as

Saccharomyces cerevisiaeAmino Acid Transport SystemsAntifungal AgentsCalcium-Transporting ATPasesEpistasis, GeneticGene Expression Regulation, FungalGolgi ApparatusMolecular ChaperonesProtein KinasesProtein Serine-Threonine KinasesRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSignal TransductionSirolimusTranscription FactorsAmino Acid Transport SystemsAntifungal AgentsCalcium-Transporting ATPasesGAP1 protein, S cerevisiaeMolecular ChaperonesNPR1 protein, S cerevisiaeProtein KinasesProtein Serine-Threonine KinasesRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSirolimusSSC1 protein, S cerevisiaetarget of rapamycin protein, S cerevisiaeTranscription Factors

Identifiers

PMID17095607
PMCPMC1693834
OpenAlexW2054050427

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.