Evidence map›Paper›PMID 17089916›Full record

ArticleFolia biologica2006

NORs and their transcription competence during the cell cycle.

E Smirnov, M Kalmárová, K Koberna, Z Zemanová, J Malínský, M Masata, Z Cvacková, K Michalová, I Raska

Open access · hybridAbstract read
In one paragraph

Article in Folia biologica, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. The chromatin landscape of the ribosomal RNA genes in mouse and human.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2019
    Review
  6. Cytogenetic instability of chromosomal nucleolar organizer regions (NORs) in cloned mouse L929 fibroblasts.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2019
    Article
  7. Reproduction of the FC/DFC units in nucleoli.Nucleus (Austin, Tex.) · 2016
    Article
  8. Nucleolar DNA: the host and the guests.Histochemistry and cell biology · 2016
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

E SmirnovInstitute of Cellular Biology and Pathology, 1st Faculty of Medicine, Charles University, Prague, Czech Republic. esmir@lfl.cuni.cz
M Kalmárová
K Koberna
Z Zemanová
J Malínský
M Masata
Z Cvacková
K Michalová
I Raska
Czech Academy of Sciences · CZCharles University · CZGeneral University Hospital in Prague · CZ

Funding

Wellcome Trust 075834Wellcome Trust /075834/04/Z
6 · The paper itself

Abstract

In human cells ribosomal genes are organized as clusters, NORs, situated on the short arms of acrocentric chromosomes. It was found that essential components of the RNA polymerase I transcription machinery, including UBF, can be detected on some NORs, termed "competent" NORs, during mitosis. The competent NORs are believed to be transcriptionally active during interphase. However, since individual NORs were not observed in the cell nucleus, their interphase status remains unclear. To address this problem, we detected the competent NORs by two commonly used methods, UBF immunofluorescence and silver staining, and combined them with FISH for visualization of rDNA and/or specific chromosomes. We found that the numbers of competent NORs on specific chromosomes were largely conserved in the subsequent cell cycles, with certain NOR-bearing homologues displaying a very stable pattern of competence. Importantly, those and only those NORs that were loaded with UBF incorporated bromo-uridine in metaphase after stimulation with roscovitine and in telophase, suggesting that competent and only competent NORs contain ribosomal genes transcriptionally active during interphase. Applying premature chromosome condensation with calyculin A, we visualized individual NORs in interphase cells, and found the same pattern of competence as observed in the mitotic chromosomes.

Indexed as

Cell CycleTranscription, GeneticChromosomes, HumanHeLa CellsHumansIn Situ Hybridization, FluorescenceInterphaseKaryotypingMetaphaseNucleolus Organizer RegionPol1 Transcription Initiation Complex ProteinsPurinesRoscovitineSilver StainingTelophasePol1 Transcription Initiation Complex ProteinsPurinesRoscovitinetranscription factor UBF

Identifiers

PMID17089916
PMCPMC2446406
OpenAlexW2165534648

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.