Evidence map›Paper›PMID 17089177›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2007

Local genetic diversity of sorghum in a village in northern Cameroon: structure and dynamics of landraces.

Adeline Barnaud, Monique Deu, Eric Garine, Doyle McKey, Hélène I Joly

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Ethnobotanical study of cowpea (Vigna unguiculata (L.) Walp.) in Senegal.Journal of ethnobiology and ethnomedicine · 2022
    Article
  3. Article
  4. Genetic diversity of Ethiopian sorghum reveals signatures of climatic adaptation.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  5. Article
  6. Review
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  8. Article
  9. Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  10. Article
  11. Article
  12. Article
  13. Assessment of genetic diversity in the sorghum reference set using EST-SSR markers.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Adeline BarnaudCIRAD, UPR 67 Gestion des Ressources Génétiques et Dynamiques Sociales, UMR 5175-CEFE, Centre d'Ecologie Fonctionnelle et Evolutive, Montpellier, 34293, France. adeline.barnaud@cefe.cnrs.fr
Monique Deu
Eric Garine
Doyle McKey
Hélène I Joly

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present the first study of patterns of genetic diversity of sorghum landraces at the local scale. Understanding landrace diversity aids in deciphering evolutionary forces under domestication, and has applications in the conservation of genetic resources and their use in breeding programs. Duupa farmers in a village in Northern Cameroon distinguished 59 named sorghum taxa, representing 46 landraces. In each field, seeds are sown as a mixture of landraces (mean of 12 landraces per field), giving the potential for extensive gene flow. What level of genetic diversity underlies the great morphological diversity observed among landraces? Given the potential for gene flow, how well defined genetically is each landrace? To answer these questions, we recorded spatial patterns of planting and farmers' perceptions of landraces, and characterized 21 landraces using SSR markers. Analysis using distance and clustering methods grouped the 21 landraces studied into four clusters. These clusters correspond to functionally and ecologically distinct groups of landraces. Within-landrace genetic variation accounted for 30% of total variation. The average F(is) over landraces was 0.68, suggesting high inbreeding within landraces. Differentiation among landraces was substantial and significant (F(st) = 0.36). Historical factors, variation in breeding systems, and farmers' practices all affected patterns of genetic variation. Farmers' practices are key to the maintenance, despite gene flow, of landraces with different combinations of agronomically and ecologically pertinent traits. They must be taken into account in strategies of conservation and use of genetic resources.

Indexed as

Genetics, PopulationGenetic VariationCameroonMinisatellite RepeatsSorghum

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.