Evidence map›Paper›PMID 17085696›Full record

ArticleApplied and environmental microbiology2007

Occurrence of virulence and antimicrobial resistance genes in Escherichia coli isolates from different aquatic ecosystems within the St. Clair River and Detroit River areas.

Katia Hamelin, Guillaume Bruant, Abdel El-Shaarawi, Stephen Hill, Thomas A Edge, John Fairbrother, Josée Harel, Christine Maynard, Luke Masson, Roland Brousseau

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

  1. Article
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  11. Article
  12. Mini-Review: Antibiotic-ResistantAntibiotics (Basel, Switzerland) · 2022
    Review
  13. Article
  14. Article
  15. Prevalence and Diversity of Antibiotic ResistantFrontiers in public health · 2022
    Article
  16. Review
  17. Is It Human or Animal? The Origin of PathogenicTropical medicine and infectious disease · 2021
    Article
  18. Article
  19. Antibiotic Resistance in Shiga ToxigenicAntibiotics (Basel, Switzerland) · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Katia HamelinBiotechnology Research Institute, National Research Council of Canada, 6100 Royalmount Ave., Montreal, Quebec, Canada H4P 2R2.
Guillaume Bruant
Abdel El-Shaarawi
Stephen Hill
Thomas A Edge
John Fairbrother
Josée Harel
Christine Maynard
Luke Masson
Roland Brousseau

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the number of Escherichia coli bacteria in surface waters can differ greatly between locations, relatively little is known about the distribution of E. coli pathotypes in surface waters used as sources for drinking or recreation. DNA microarray technology is a suitable tool for this type of study due to its ability to detect high numbers of virulence and antimicrobial resistance genes simultaneously. Pathotype, phylogenetic group, and antimicrobial resistance gene profiles were determined for 308 E. coli isolates from surface water samples collected from diverse aquatic ecosystems at six different sites in the St. Clair River and Detroit River areas. A higher frequency (48%) of E. coli isolates possessing virulence and antimicrobial resistance genes was observed in an urban site located downstream of wastewater effluent outfalls than in the other examined sites (average of 24%). Most E. coli pathotypes were extraintestinal pathogenic E. coli (ExPEC) pathotypes and belonged to phylogenetic groups B2 and D. The ExPEC pathotypes were found to occur across all aquatic ecosystems investigated, including riverine, estuarine, and offshore lake locations. The results of this environmental study using DNA microarrays highlight the widespread distribution of E. coli pathotypes in aquatic ecosystems and the potential public health threat of E. coli pathotypes originating from municipal wastewater sources.

Indexed as

EcosystemBacterial ProteinsCanadaDrug Resistance, BacterialEscherichia coliEscherichia coli InfectionsHumansMichiganOligonucleotide Array Sequence AnalysisPhylogenyRiversVirulenceVirulence FactorsBacterial ProteinsVirulence Factors

Identifiers

PMID17085696
PMCPMC1796988

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.