Evidence map›Paper›PMID 17085634›Full record

ArticleEukaryotic cell2007

Proteomic and microarray analyses of the Dictyostelium Zak1-GSK-3 signaling pathway reveal a role in early development.

Lana Strmecki, Gareth Bloomfield, Tsuyoshi Araki, Emma Dalton, Jason Skelton, Christina Schilde, Adrian Harwood, Jeffrey G Williams, Al Ivens, Catherine Pears

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Lana StrmeckiBiochemistry Department, Oxford University, South Parks Rd., Oxford OX1 3QU, United Kingdom.
Gareth Bloomfield
Tsuyoshi Araki
Emma Dalton
Jason Skelton
Christina Schilde
Adrian Harwood
Jeffrey G Williams
Al Ivens
Catherine Pears
University of Dundee · GBCardiff University · GBUniversity of Oxford · GBMRC Laboratory of Molecular Biology · GBWellcome Sanger Institute · GBWellcome Trust · GB

Funding

Medical Research Council MC_U105115237Wellcome Trust 053640/ZWellcome Trust 063612Wellcome Trust 064724
6 · The paper itself

Abstract

GskA, the Dictyostelium GSK-3 orthologue, is modified and activated by the dual-specificity tyrosine kinase Zak1, and the two kinases form part of a signaling pathway that responds to extracellular cyclic AMP. We identify potential cellular effectors for the two kinases by analyzing the corresponding null mutants. There are proteins and mRNAs that are altered in abundance in only one or the other of the two mutants, indicating that each kinase has some unique functions. However, proteomic and microarray analyses identified a number of proteins and genes, respectively, that are similarly misregulated in both mutant strains. The positive correlation between the array data and the proteomic data is consistent with the Zak1-GskA signaling pathway's functioning by directly or indirectly regulating gene expression. The discoidin 1 genes are positively regulated by the pathway, while the abundance of the H5 protein is negatively regulated. Two of the targets, H5 and discoidin 1, are well-characterized markers for early development, indicating that the Zak1-GskA pathway plays a role in development earlier than previously observed.

Indexed as

Gene Expression ProfilingAnimalsBlotting, WesternCyclic AMPDictyosteliumElectrophoresis, Gel, Two-DimensionalGene Expression RegulationGenome, ProtozoanGlycogen Synthase Kinase 3Microarray AnalysisOligonucleotide Array Sequence AnalysisProtein-Tyrosine KinasesProteomeSignal TransductionCyclic AMPGlycogen Synthase Kinase 3Protein-Tyrosine KinasesProteome

Identifiers

PMID17085634
PMCPMC1797958
OpenAlexW2095661528

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.