Evidence map›Paper›PMID 17085507›Full record

ArticlePlant physiology2007

Dissection of the AtNRT2.1:AtNRT2.2 inducible high-affinity nitrate transporter gene cluster.

Wenbin Li, Ye Wang, Mamoru Okamoto, Nigel M Crawford, M Yaeesh Siddiqi, Anthony D M Glass

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 142 papers.

0numbers the graph read from it
0cells of the map it votes in
142citing papers in PubMed
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

142 citing papers in PubMed, 361 citations in OpenAlex.

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82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Wenbin LiDepartment of Botany, University of British Columbia, Vancouver, British Columbia, Canada V6T1Z4.
Ye Wang
Mamoru Okamoto
Nigel M Crawford
M Yaeesh Siddiqi
Anthony D M Glass
University of British Columbia · CAUniversity of California San Diego · US

Funding

Molecular Genetics of Nitrate Metabolism and RegulationR01GM040672 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CRAWFORD, NIGEL M. · 1994 to 2010
$3.3M
MOLECULAR GENETICS OF NITRATE REDUCTASE IN ARABIDOPSISR29GM040672 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI CRAWFORD, NIGEL M. · 1988 to 1992
–
NIGMS NIH HHS GM40672
6 · The paper itself

Abstract

Using a new Arabidopsis (Arabidopsis thaliana) mutant (Atnrt2.1-nrt2.2) we confirm that concomitant disruption of NRT2.1 and NRT2.2 reduces inducible high-affinity transport system (IHATS) by up to 80%, whereas the constitutive high-affinity transport system (CHATS) was reduced by 30%. Nitrate influx via the low-affinity transport system (LATS) was unaffected. Shoot-to-root ratios were significantly reduced compared to wild-type plants, the major effect being upon shoot growth. In another mutant uniquely disrupted in NRT2.1 (Atnrt2.1), IHATS was reduced by up to 72%, whereas neither the CHATS nor the LATS fluxes were significantly reduced. Disruption of NRT2.1 in Atnrt2.1 caused a consistent and significant reduction of shoot-to-root ratios. IHATS influx and shoot-to-root ratios were restored to wild-type values when Atnrt2.1-nrt2.2 was transformed with a NRT2.1 cDNA isolated from Arabidopsis. Disruption of NRT2.2 in Atnrt2.2 reduced IHATS by 19% and this reduction was statistically significant only at 6 h after resupply of nitrate to nitrogen-deprived plants. Atnrt2.2 showed no significant reduction of CHATS, LATS, or shoot-to-root ratios. These results define NRT2.1 as the major contributor to IHATS. Nevertheless, when maintained on agar containing 0.25 mm KNO(3) as the sole nitrogen source, Atnrt2.1-nrt2.2 consistently exhibited greater stress and growth reduction than Atnrt2.1. Evidence from real-time PCR revealed that NRT2.2 transcript abundance was increased almost 3-fold in Atnrt2.1. These findings suggest that NRT2.2 normally makes only a small contribution to IHATS, but when NRT2.1 is lost, this contribution increases, resulting in a partial compensation.

Indexed as

Multigene FamilyAgarAnion Transport ProteinsArabidopsisArabidopsis ProteinsBiological TransportMolecular Sequence DataMutagenesis, InsertionalMutationNitratesPlant RootsPlant ShootsPolymerase Chain ReactionRNA, MessengerAgarAnion Transport ProteinsArabidopsis ProteinsNitratesNRT2.1 protein, ArabidopsisNRT2.2 protein, ArabidopsisRNA, Messenger

Identifiers

PMID17085507
PMCPMC1761961
OpenAlexW2069003130

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.