Evidence map›Paper›PMID 17084860›Full record

ArticleJournal of molecular biology2007

Role of a single amino acid in the evolution of glycans of invertebrates and vertebrates.

Boopathy Ramakrishnan, Pradman K Qasba

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Glycosyltransferase engineering for carbohydrate synthesis.Biochemical Society transactions · 2016
    Review
  7. Article
  8. Article
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  10. Review
  11. Article
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  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Boopathy RamakrishnanStructural Glycobiology Section, CCR Nanobiology Program, Center for Cancer Research, National Cancer Institute at Frederick, Frederick, MD 21702, USA.
Pradman K Qasba
Frederick National Laboratory for Cancer Research · USScience Applications International Corporation (United States) · US

Funding

SEA Influenza Clinical Research NetworkN01CO12400 · NCI · LEIDOS BIOMEDICAL RESEARCH, INC. · 2007 to 2008
$225.2M
Structure-Function Studies and Design of Novel GlycosyltransferasesZ01BC009304 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI QASBA, PRADMAN K · 1996 to 2008
$631k
Intramural NIH HHSNCI NIH HHS N01 CO 12400NCI NIH HHS Z01 BC009304-11
6 · The paper itself

Abstract

Structures of glycoconjugate N-glycans and glycolipids of invertebrates show significant differences from those of vertebrates. These differences are due largely to the vertebrate beta1,4-galactosyltransferase-1 (beta4Gal-T1), which is found as a beta1,4-N-acetylgalactosaminyltransferase (beta4GalNAc-T1) in invertebrates. Mutation of Tyr285 to Ile or Leu in human beta4Gal-T1 converts the enzyme into an equally efficient beta4GalNAc-T1. A comparison of all the human beta4Gal-T1 ortholog enzymes shows that this Tyr285 residue in human beta4Gal-T1 is conserved either as Tyr or Phe in all vertebrate enzymes, while in all invertebrate enzymes it is conserved as an Ile or Leu. We find that mutation of the corresponding Ile residue to Tyr in Drosophila beta4GalNAc-T1 converts the enzyme to a beta4Gal-T1 by reducing its N-acetylgalactosaminyltransferase activity by nearly 1000-fold, while enhancing its galactosyltransferase activity by 80-fold. Furthermore, we find that, similar to the vertebrate/mammalian beta4Gal-T1 enzymes, the wild-type Drosophila beta4GalNAc-T1 enzyme binds to a mammary gland-specific protein, alpha-lactalbumin (alpha-LA). Thus, it would seem that, during the evolution of vertebrates from invertebrates over 500 million years ago, beta4Gal-T1 appeared as a result of the single amino acid substitution of Tyr or Phe for Leu or Ile in the invertebrate beta4GalNAc-T1. Subsequently, the pre-existing alpha-LA-binding site was utilized during mammalian evolution to synthesize lactose in the mammary gland during lactation.

Indexed as

Amino Acid SubstitutionEvolution, MolecularAcetylgalactosamineAmino Acid SequenceAnimalsCatalysisDrosophilaGalactosyltransferasesGlycoconjugatesHumansInvertebratesLactalbuminManganeseMolecular Sequence DataN-AcetylgalactosaminyltransferasesPolysaccharidesAcetylgalactosaminebeta-1,4-galactosyltransferase IGalactosyltransferasesGlycoconjugatesLactalbuminManganeseN-Acetylgalactosaminyltransferases(N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferasePolysaccharidesRecombinant ProteinsUridine Diphosphate

Identifiers

PMID17084860
PMCPMC1850938
OpenAlexW2052612886

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.