Evidence map›Paper›PMID 17083467›Full record

ArticleMolecular microbiology2006

A peptidoglycan hydrolase motif within the mycobacteriophage TM4 tape measure protein promotes efficient infection of stationary phase cells.

Mariana Piuri, Graham F Hatfull

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 135 citations in OpenAlex.

  1. Article
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  5. Review
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  12. Viral Genome Delivery Across Bacterial Cell Surfaces.Annual review of microbiology · 2024
    Review
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  18. Comparative Genomics of Six LyticPHAGE (New Rochelle, N.Y.) · 2022
    Article
  19. Article
  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Mariana PiuriPittsburgh Bacteriophage Institute and Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Graham F Hatfull
University of Pittsburgh · US

Funding

MOLECULAR BIOLOGY OF MYCOBACTERIA AND THEIR PHAGESR01AI028927 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HATFULL, GRAHAM F. · 1995 to 2004
$1.0M
MOLECULAR BIOLOGY OF MYCOBACTERIA &THEIR PHAGESR29AI028927 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HATFULL, GRAHAM F. · 1990 to 1994
–
NIAID NIH HHS AI28927NIAID NIH HHS R01 AI028927
6 · The paper itself

Abstract

The predominant morphotype of mycobacteriophage virions has a DNA-containing capsid attached to a long flexible non-contractile tail, features characteristic of the Siphoviridae. Within these phage genomes the tape measure protein (tmp) gene can be readily identified due to the well-established relationship between the length of the gene and the length of the phage tail--because these phages typically have long tails, the tmp gene is usually the largest gene in the genome. Many of these mycobacteriophage Tmp's contain small motifs with sequence similarity to host proteins. One of these motifs (motif 1) corresponds to the Rpf proteins that have lysozyme activity and function to stimulate growth of dormant bacteria, while the others (motifs 2 and 3) are related to proteins of unknown function, although some of the related proteins of the host are predicted to be involved in cell wall catabolism. We show here that motif 3-containing proteins have peptidoglycan-hydrolysing activity and that while this activity is not required for phage viability, it facilitates efficient infection and DNA injection into stationary phase cells. Tmp's of mycobacteriophages may thus have acquired these motifs in order to avoid a selective disadvantage that results from changes in peptidoglycan in non-growing cells.

Indexed as

Amino Acid MotifsAmino Acid SequenceBlotting, WesternElectrophoresis, Polyacrylamide GelGenome, ViralLuciferasesMicroscopy, ElectronModels, BiologicalMolecular Sequence DataMycobacteriophagesMycobacterium smegmatisN-Acetylmuramoyl-L-alanine AmidaseProtein Structure, TertiaryRecombinant Fusion ProteinsSequence Homology, Amino AcidVancomycinLuciferasesN-Acetylmuramoyl-L-alanine AmidaseRecombinant Fusion ProteinsVancomycinViral Proteins

Identifiers

PMID17083467
PMCPMC1796659
OpenAlexW2140756478

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.