Evidence map›Paper›PMID 17075921›Full record

ArticleJournal of neuroscience research2007

5'UTR of the neurogenic bHLH Nex1/MATH-2/NeuroD6 gene is regulated by two distinct promoters through CRE and C/EBP binding sites.

Martine Uittenbogaard, Debra L Martinka, Peter F Johnson, Charles Vinson, Anne Chiaramello

Open access · greenAbstract read
In one paragraph

Article in Journal of neuroscience research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Autoregulation of co-chaperone BAG3 gene transcription.Journal of cellular biochemistry · 2009
    Article
  5. Cloning and characterization of the 5'UTR of the rat anti-apoptotic Bcl-w gene.Biochemical and biophysical research communications · 2009
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Martine UittenbogaardDepartment of Anatomy and Cell Biology, George Washington University Medical Center, Washington, DC, USA.
Debra L Martinka
Peter F Johnson
Charles Vinson
Anne Chiaramello
George Washington University · USCenter for Cancer Research · USNational Cancer Institute · USWashington University Medical Center · US

Funding

NEUROIMAGING COREP30HD040677 · NICHD · CHILDREN'S RESEARCH INSTITUTE · PI VITTORIO GALLO, VITTORIO GALLO VITTORIO GALLO · 2001 to 2015
$15.9M
Transcriptional Dynamics of Neuronal SurvivalR01NS041391 · NINDS · GEORGE WASHINGTON UNIVERSITY · PI CHIARAMELLO, ANNE ELIANE · 2001 to 2010
$2.4M
NICHD NIH HHS P30 HD040677NICHD NIH HHS P30 HD40677NINDS NIH HHS R01 NS041391NINDS NIH HHS R01-NS 041391
6 · The paper itself

Abstract

Expression of the bHLH transcription factor Nex1/MATH-2/NeuroD6, a member of the NeuroD subfamily, parallels overt neuronal differentiation and synaptogenesis during brain development. Our previous studies have shown that Nex1 is a critical effector of the NGF pathway and promotes neuronal differentiation and survival of PC12 cells in the absence of growth factors. In this study, we investigated the transcriptional regulation of the Nex1 gene during NGF-induced neuronal differentiation. We found that Nex1 expression is under the control of two conserved promoters, Nex1-P1 and Nex1-P2, located in two distinct non-coding exons. Both promoters are TATA-less with multiple transcription start sites, and are activated on NGF or cAMP exposure. Luciferase-reporter assays showed that the Nex1-P2 promoter activity is stronger than the Nex1-P1 promoter activity, which supports the previously reported differential expression levels of Nex1 transcripts throughout brain development. Using a combination of DNaseI footprinting, EMSA assays, and site-directed mutagenesis, we identified the essential regulatory elements within the first 2 kb of the Nex1 5'UTR. The Nex1-P1 promoter is mainly regulated by a conserved CRE element, whereas the Nex1-P2 promoter is under the control of a conserved C/EBP binding site. Overexpression of wild-type C/EBPbeta resulted in increased Nex1-P2 promoter activity in NGF-differentiated PC12 cells. The fact that Nex1 is a target gene of C/EBPbeta provides new insight into the C/EBP transcriptional cascade known to promote neurogenesis, while repressing gliogenesis.

Indexed as

5' Untranslated RegionsAnimalsBasic Helix-Loop-Helix ProteinsBinding SitesCCAAT-Enhancer-Binding Protein-betaCell DifferentiationCloning, MolecularCyclic AMP Response Element-Binding ProteinDNA FootprintingElectrophoretic Mobility Shift AssayGene Expression RegulationHelix-Loop-Helix MotifsHumansLuciferasesMiceModels, Molecular5' Untranslated RegionsBasic Helix-Loop-Helix ProteinsCCAAT-Enhancer-Binding Protein-betaCyclic AMP Response Element-Binding ProteinLuciferasesNerve Growth Factor

Identifiers

PMID17075921
PMCPMC2767119
OpenAlexW2097901004

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.