Evidence map›Paper›PMID 17071764›Full record

ArticleJournal of bacteriology2007

Linker regions of the RhaS and RhaR proteins.

Ana Kolin, Visnja Jevtic, Liskin Swint-Kruse, Susan M Egan

Abstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Active role of the interdomain linker of AraC.Journal of bacteriology · 2011
    Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ana KolinDepartment of Molecular Biosciences, 1200 Sunnyside Ave., University of Kansas, Lawrence, KS 66045, USA.
Visnja Jevtic
Liskin Swint-Kruse
Susan M Egan

Funding

TRAFFICKING OF THE PLASMA MEMBRANE CA2+-ATPASE TO RAFTSP20RR017708 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI FISCHER, CHRISTOPHER JAMES · 2002 to 2011
$20.1M
Transcription Activation at the rhaBAD OperonR01GM055099 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI EGAN, SUSAN M · 2005 to 2008
$820k
TRANSCRIPTION ACTIVATION AT THE RHABAD OPERONR29GM055099 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI EGAN, SUSAN M · 1997 to 2001
$215k
NCRR NIH HHS P20 RR017708NCRR NIH HHS RR-P20 RR17708NIGMS NIH HHS GM55099NIGMS NIH HHS R01 GM055099NIGMS NIH HHS R29 GM055099
6 · The paper itself

Abstract

Substitutions within the interdomain linkers of the AraC/XylS family proteins RhaS and RhaR were tested to determine whether side chain identity or linker structure was required for function. Neither was found crucial, suggesting that the linkers do not play a direct role in activation, but rather simply connect the two domains.

Indexed as

AlanineAmino Acid SequenceAmino Acid SubstitutionAraC Transcription FactorDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsMolecular Sequence DataProtein Structure, TertiaryRhamnoseSequence AlignmentTrans-ActivatorsTranscription FactorsAlanineAraC protein, E coliAraC Transcription FactorDNA-Binding ProteinsEscherichia coli ProteinsRhamnoseRhaR protein, E coliRhaS protein, E coliTrans-ActivatorsTranscription Factors

Identifiers

PMID17071764
PMCPMC1797203

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.