Evidence map›Paper›PMID 17070801›Full record

ArticleExperimental eye research2007

Differential expression of photoreceptor-specific genes in the retina of a zebrafish cadherin2 mutant glass onion and zebrafish cadherin4 morphants.

Q Liu, R A Frey, S G Babb-Clendenon, B Liu, J Francl, A L Wilson, J A Marrs, D L Stenkamp

Open access · greenAbstract read
In one paragraph

Article in Experimental eye research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Abnormal retinal development in Cloche mutant zebrafish.Developmental dynamics : an official publication of the American Association of Anatomists · 2015
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Diversity of sensory guanylate cyclases in teleost fishes.Molecular and cellular biochemistry · 2010
    Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Q LiuDepartment of Biology, University of Akron, 302 Buchtel Common, Akron, OH 44325, USA. qliu@uakron.edu
R A Frey
S G Babb-Clendenon
B Liu
J Francl
A L Wilson
J A Marrs
D L Stenkamp
University of Akron · USUniversity of Idaho · USIndiana University – Purdue University Indianapolis · USUniversity Medical Center · US

Funding

ZEBRAFISH INTERNATIONAL RESOURCE CENTERP40RR012546 · NCRR · UNIVERSITY OF OREGON · PI WESTERFIELD, MONTE · 1998 to 2011
$21.9M
Patterning Genes in Retinal DevelopmentR01EY012146 · NEI · UNIVERSITY OF IDAHO · PI Deborah L Stenkamp · 2004 to 2026
$6.7M
CELL ADHESION FUNCTION IN THE VISUAL SYSTEMR01EY011365 · NEI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI MARRS, JAMES A · 2002 to 2004
$1.1M
Protocadherin-17 and -9 Function in Retinal DevelopmentR15EY013879 · NEI · UNIVERSITY OF AKRON · PI LIU, QIN · 2001 to 2011
$959k
PATTERNING GENES IN RETINAL DEVELOPMENTR29EY012146 · NEI · UNIVERSITY OF IDAHO · PI STENKAMP, DEBORAH L · 1998 to 2002
$299k
CELL ADHESION INDUCED DIFFERENTITATION IN EYE TISSUER29EY011365 · NEI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI MARRS, JAMES A · 1996 to 2000
$113k
NCRR NIH HHS P40 RR012546NCRR NIH HHS P40 RR12546NEI NIH HHS EY11365NEI NIH HHS EY12146NEI NIH HHS EY13879NEI NIH HHS R01 EY011365NEI NIH HHS R01 EY012146NEI NIH HHS R15 EY013879NEI NIH HHS R29 EY011365NEI NIH HHS R29 EY012146
6 · The paper itself

Abstract

Cadherins are Ca2+ -dependent transmembrane molecules that mediate cell-cell adhesion through homophilic interactions. Cadherin2 (also called N-cadherin) and cadherin4 (also called R-cadherin), members of the classic cadherin subfamily, have been shown to be involved in development of a variety of tissues and organs including the visual system. To gain insight into cadherin2 and cadherin4 function in differentiation of zebrafish photoreceptors, we have analyzed expression patterns of several photoreceptor-specific genes (crx, gnat1, gnat2, irbp, otx5, rod opsin, rx1, and uv opsin) and/or a cone photoreceptor marker (zpr-1) in the retina of a zebrafish cadherin2 mutant, glass onion (glo) and in zebrafish embryos injected with a cadherin4 specific antisense morpholino oligonucleotide (cdh4MO). We find that expression of all these genes, and of zpr-1, is greatly reduced in the retina of both the glo and cadherin4 morphants. Moreover, in these embryos, expression of some genes (e.g. gnat1, gnat2 and irbp) is more affected than others (e.g. rod opsin and uv opsin). In embryos with both cadherins functions blocked (glo embryos injected with the cdh4MO), the eye initially formed, but became severely and progressively disintegrated and expressed little or no crx and otx5 as development proceeded. Our results suggest that cadherin2 and cadherin4 play important roles in the differentiation of zebrafish retinal photoreceptors.

Indexed as

AnimalsCadherinsCell DifferentiationEyeEye ProteinsGene Expression Regulation, DevelopmentalMutationPhotoreceptor Cells, VertebrateRetinaZebrafishZebrafish ProteinsCadherinsEye ProteinsN-cadherin, zebrafishR-cadherinZebrafish Proteins

Identifiers

PMID17070801
PMCPMC1853368
OpenAlexW1998313889

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.